Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2900 |
Symbol | |
ID | 6111851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 3204948 |
End bp | 3206324 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641622687 |
Product | L-serine dehydratase 1 |
Protein accession | YP_001749761 |
Protein GI | 170722073 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATCA GTGTTTTCGA CCTTTTCAAA ATCGGCATCG GCCCATCCAG TTCCCACACC GTCGGCCCCA TGCGGGCAGC CGCTACCTTC GCTCAGGCAT TGCGCACCCA GGGTTTGCTG GGCCAGGTAA GGCGTATCGA AGTGCGGCTT TATGGTTCGC TTTCCGCCAC GGGTGTGGGC CATGCCACTG ACCACGCCTG CCTGCTCGGC CTGATGGGGC AGTGGCCGGA CCGGATCGAC CCGGCCACCA TCGAGTCACG CATCGCTCAG GTGATGCAGG AGCAATGCCT GATGCTCGAC GCCAGCCACC CGCTGACCTT CATCTATGCA CGCGACATGC TGCTGCTGGA CGAAAACCTG GCGTATCACC CCAATGCCAT GACCCTGGAG GCAATGGACG AACAGGGCAG CCTGCTCAGC CAGACCTACT ATTCCGTTGG CGGCGGCTTC ATTGTCGAGC AGGGTGAAAT CGACGCGCCC CAGAGCCAGG CGGCTGCAGT CACGCTGCCC TACGAATTCT CCAGTGCCGC CCAGTTGCTG GCGCTGTGCA AGGCCCACCA GCTGAGCGTT GCCCAGCTGA TGCTGGCCAA CGAATGCGCC TGGCGCCCCG AAGCCGAGGT GCGCGAAGGG CTGCTGCGGA TATGGGCTGC AATGCGTGAA TGCGTCGACA ACGGCCTACG CAATGAGGGC ATCCTGCCTG GCGGGCTGGG CGTCAAGCGC CGCGCTGCAC GCTTGCATCG CAGCCTGCAG GAACTGGGCA AACCCAATGT GATCGGCTCG ACCCTGAGCG CGATGGAGTG GGTCAATCTG TTCGCCCTGG CGGTCAATGA AGAGAACGCC GCTGGCGGGC GCATGGTCAC AGCGCCGACC AACGGTGCGG CGGGCATCAT CCCCGCGGTG TTGCACTACT ACATGAAATT CAACCCCGCT ACCTGTGACG ACGATGTGGT GGAATTCCTG CTGGCCGCTG CCGCTGTCGG CATCCTGTGC AAGAAGAATG CATCGATCTC CGGTGCCGAG GTGGGCTGCC AGGGCGAGGT GGGCTCGGCG TGCTCGATGG CCGCGGCCGG CCTTGCCCAA GTGCTGGGCG CTACACCGCC GCAGTTGGAA AACGCCGCCG AGATTGCCCT GGAACACAAC CTGGGCTTGA CCTGCGACCC GGTCGGTGGG CTGGTCCAGG TGCCGTGCAT CGAGCGCAAT GCGATTGCCG CGGTCAAGGC GATCAATGCC GTGCAGATGG CCCTGCGCGG TGATGGCGAG CACTTCATCT CGCTTGATCG GGTGATCCGT ACCATGCGTG ATACCGGCGC CGACATGCAT GCCAATTACA AGGAAACGTC GCGTGGTGGT TTGGCGGTGG CGTTCGTCGA GTGCTGA
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Protein sequence | MAISVFDLFK IGIGPSSSHT VGPMRAAATF AQALRTQGLL GQVRRIEVRL YGSLSATGVG HATDHACLLG LMGQWPDRID PATIESRIAQ VMQEQCLMLD ASHPLTFIYA RDMLLLDENL AYHPNAMTLE AMDEQGSLLS QTYYSVGGGF IVEQGEIDAP QSQAAAVTLP YEFSSAAQLL ALCKAHQLSV AQLMLANECA WRPEAEVREG LLRIWAAMRE CVDNGLRNEG ILPGGLGVKR RAARLHRSLQ ELGKPNVIGS TLSAMEWVNL FALAVNEENA AGGRMVTAPT NGAAGIIPAV LHYYMKFNPA TCDDDVVEFL LAAAAVGILC KKNASISGAE VGCQGEVGSA CSMAAAGLAQ VLGATPPQLE NAAEIALEHN LGLTCDPVGG LVQVPCIERN AIAAVKAINA VQMALRGDGE HFISLDRVIR TMRDTGADMH ANYKETSRGG LAVAFVEC
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