Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2845 |
Symbol | |
ID | 6111796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 3148354 |
End bp | 3149703 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641622632 |
Product | major facilitator transporter |
Protein accession | YP_001749706 |
Protein GI | 170722018 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00893] d-galactonate transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.498164 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATGCTG ATCAGCCTAT CGGTGCCGGA GTGTTCGACA CGCCTGCGCG CCAGCAGCAA CGTACCCGTA CCCGTTTCAT GATCCTGGCG CTGATCTCTG GCGGCACCAT GATCAACTAC CTGGACCGCA GCGTCATGGG CATCGCCGCG CCAAGCATCA GCGCCGATCT TGGCCTTAAT GCGGCGATGA TGGGGGTGAT TTTCTCGGCG TTCTCATGGA CCTACGCTGC TGCGCAGATT CCCGGCGGCA TATTGATCGA CCGGCTGGGC ACCAAGCTCA CCTACTGGTT GGCACTGACG TTGTGGTCGC TGTTCACCGG TCTGCAGGGC TTGGCCCAGG GGTTTCTGTC CTTGCTGGGC ATGCGCTTTC TGGTCGGTGT GACAGAAGCG CCGTGCTTCC CCACCAACAG CCGCGTGGTG GCGACCTGGT TCCCGCAAAG CGAGCGGGCC AGGGCGACGG GTATCTACAC CTTTGCCGAG TACACCGGCC TTGCTTTCCT GACACCGTTA CTGTTTTGGG TCTTGCACGC CTATGGCTGG CGCTTTCTGC TGATGGCGGT CGGATTGATG GGCGTCCTCT ATGGGGTGGT CTGGTGGCGC AAGTACCATG AGCCACACCA GTCGACCACC GCCAACCAGG CAGAGCTGGA CTACATCGCT GCCGGCGGTG GCGTGGTCGA TGGTGGCCAG AAAGCCACTG TCTTCCAGTG GTCACAGATC CCGGCGCTGC TCAAGCACCG CAACATGCTC GGTATCTGCC TGGGGCAGTT CGCCTGCAAC TCGACCAACG TGTTCTTCCT CACCTGGTTC CCGACCTACC TGGTCACCGA GCGGCATATG CCGTGGCTCA AGGTCGGCTG GGTGGCGGTG CTGCCGTTCA TCGCTGCTTC GTTGGGCACG CTGGTCGGCG GCTGGCTCTC CGATGCCTTG CTGCGCCGCG GCTACTCGCT GAATGTGGCG CGCAAGCTGC CGGTGATCGC CGGCCTGCTG ACCGCGTCGG TCATTGTCCT GGCCAACTAT GTCGAGTCGG ACGTGCTGGT CATCGCCATC CTCTGTATTG CCTATTTCGC CCAGGGTATG TCGGCCCTGG CCTGGATGAT CGTTTCCGAC ATCGCGCCCA AAGGCTTGCT GGGCCTCAGT GGCGGGCTGT TCAACTTGTT CGCCAACGCC GCCGGCATCG TTACCCCGTT GACCATCGGC CTGATCGTGA CGGCCACGGG GTCATTCGTC TGGGCCCTGG TGTTCGTGTC CTCGATTACC GCGCTTGGCG CGCTGTGTTA CCTGTTCATG GTGCGTGACC TGCGTCGCCT ACCGGATATT CCCTGTGTTG AAAAAGGAGC TGAACAATGA
|
Protein sequence | MNADQPIGAG VFDTPARQQQ RTRTRFMILA LISGGTMINY LDRSVMGIAA PSISADLGLN AAMMGVIFSA FSWTYAAAQI PGGILIDRLG TKLTYWLALT LWSLFTGLQG LAQGFLSLLG MRFLVGVTEA PCFPTNSRVV ATWFPQSERA RATGIYTFAE YTGLAFLTPL LFWVLHAYGW RFLLMAVGLM GVLYGVVWWR KYHEPHQSTT ANQAELDYIA AGGGVVDGGQ KATVFQWSQI PALLKHRNML GICLGQFACN STNVFFLTWF PTYLVTERHM PWLKVGWVAV LPFIAASLGT LVGGWLSDAL LRRGYSLNVA RKLPVIAGLL TASVIVLANY VESDVLVIAI LCIAYFAQGM SALAWMIVSD IAPKGLLGLS GGLFNLFANA AGIVTPLTIG LIVTATGSFV WALVFVSSIT ALGALCYLFM VRDLRRLPDI PCVEKGAEQ
|
| |