Gene PputW619_2717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_2717 
Symbol 
ID6111668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp3010324 
End bp3011715 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content64% 
IMG OID641622504 
Productcitrate transporter 
Protein accessionYP_001749578 
Protein GI170721890 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism 
COG ID[COG2610] H+/gluconate symporter and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.203556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0827168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGC TCATCGCCCT CGCCGCTTTG GCCCTGCTGA TGCTGGCCGC CTACCGCGGT 
TACAGCGTGA TCCTCTTCGC ACCAATCGCC GCCCTCGGCG CGGTGCTGCT GACCGACCCC
GCCGCCGTGG CGCCCGCCTT TACCGGGGTG TTCATGGAAA AGATGGTCGG CTTCATCAAG
CTGTACTTTC CGGTGTTCCT GCTTGGCGCG GTGTTCGGCA AGCTCATCGA ACTGTCCGGT
TTCTCGCGCT CGATCGTCGC CGCGGCCATC CGCCTGCTCG GCACCCGCCA GGCCATGCTG
GTGATCGTGC TCGTTTGCGC TTTGCTCACT TATGGTGGGG TATCGCTGTT TGTGGTGGTG
TTCGCGGTGT ACCCGTTCGC CGCCGAAATG TTCCGCCAAA GTGATATTCC CAAGCGCCTG
ATCCCGGCAA CCATCGCCTT GGGCGCCTTC TCGTTCACCA TGGACGCCCT GCCCGGCACC
CCGCAGATCC AGAACATCAT CCCCAGCACC TTCTTCAACA CCACCGCCTG GGCCGCGCCC
TGGTTGGGAC TGATTGGCAC GGTGTTCGTG TTCTGCAGCG GCATGCTTTA CCTGCAACGC
CAGCGTAATA AGGCCCAGCG CGCCGGCGAG GGCTATGGCA GCAACCTGCG CAACGAACCG
GAAACTGCCG CCGACCTGAC CTTGCCCAAC CCATGGCTCG CGCTTTCGCC GCTGGTGCTG
GTGGGGGTGA TGAACCTGCT GTTCACCCAC TGGATCCCGC AGTGGTATGG GGCCAGCCAT
ACCCTGCAAC TGCCGGGCAT GAGTGCGCCG GTGAACAGCG ACGTGGCCAA GCTCACGGCG
ATCTGGGCAG TGCAGGCCGC GCTGCTGGTC GGCATCCTGA TGGTGCTGGT GTGCGCCTTC
GGCGCCATCC GTGAGCGCCT GGCCGAAGGC ACCAAGAGCG CTGTCGGTGG CGCTTTGCTG
GCCGCCATGA ACACCGCTTC AGAATACGGC TTTGGTGCGG TGATCGCTTC GCTGCCGGGC
TTTCTGGTAT TGGCCGATGC CCTGCGCGGC ATCCCCAACC CGCTGGTCAA TGAAGCTATC
ACCGTGACCT TACTGGCCGG CATCACCGGC TCCGCCTCAG GCGGCATGAG CATTGCCCTG
GCGGCCATGG GCGACAGCTT CATCGCTGCG GCAAACGCCG CCAACATCCC GCTCGAGGTG
CTGCACCGGG TGGCCGCCAT GGCCAGCGGC GGCATGGACA CCCTGCCGCA CAACGGTGCG
GTGATCACCT TGCTGGCCGT CACCGGCTTG ACCCACCGCG AGGCCTACAA AGACATTTTC
GGTATTACCC TGATCAAGAC CCTGGCCGTC TTCGTGGTCA TCGCCACGTT CTACGCCACC
GGCATCGTCT AA
 
Protein sequence
MTVLIALAAL ALLMLAAYRG YSVILFAPIA ALGAVLLTDP AAVAPAFTGV FMEKMVGFIK 
LYFPVFLLGA VFGKLIELSG FSRSIVAAAI RLLGTRQAML VIVLVCALLT YGGVSLFVVV
FAVYPFAAEM FRQSDIPKRL IPATIALGAF SFTMDALPGT PQIQNIIPST FFNTTAWAAP
WLGLIGTVFV FCSGMLYLQR QRNKAQRAGE GYGSNLRNEP ETAADLTLPN PWLALSPLVL
VGVMNLLFTH WIPQWYGASH TLQLPGMSAP VNSDVAKLTA IWAVQAALLV GILMVLVCAF
GAIRERLAEG TKSAVGGALL AAMNTASEYG FGAVIASLPG FLVLADALRG IPNPLVNEAI
TVTLLAGITG SASGGMSIAL AAMGDSFIAA ANAANIPLEV LHRVAAMASG GMDTLPHNGA
VITLLAVTGL THREAYKDIF GITLIKTLAV FVVIATFYAT GIV