| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2510 |
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| Symbol | |
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| ID | 6111463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2791599 |
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| End bp | 2792132 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641622305 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001749379 |
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| Protein GI | 170721691 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.203105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.816356 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAGA AGGAAAGTAC CCAGCACAAA CTCGACCGCG TTCGCGCGCC GCGGGTTCAC
ATCACTTACG ACGTGGACAT CGGTGATGCG ATCGAGAAAA AGGAGCTGCC CTTTGTCGTT
GGCGTGCTGG GCGATTTTTC CGGCAACCCG CTGGAGCCCT TGCCCAAGCT CAAGGACCGC
AAGTTCGTCT TCATCGACCG CGACAACTTC AACGGCGTGC TCAAAGGCAT CAAGCCGCGC
CTGACCTACC GCGTCGACAA CACCCTGGCC AAAAACGGCA CCCAGCTGGG CGTGGAGCTG
AACTTCAACA GCATGGAAGA CTTCGAGCCA CAGAACGTGG TGAAGCAAGT CGAGCCACTG
CGCAAGCTTT TGGAAGTGCG CAACAAGCTG GCCGACCTGC GTAACAAGAT GGGCGGCAAC
GACAAGCTCG AAGAGTTGCT GATGGACGTG CTGCAGAACA CCGAGAAGCT GAAAACCCTG
GGCAAGGAAT TCGGTCGCGA AGCCGCCGTA CCCGCCGCCG ATGGCAAAGA GTAA
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| Protein sequence | MAKKESTQHK LDRVRAPRVH ITYDVDIGDA IEKKELPFVV GVLGDFSGNP LEPLPKLKDR
KFVFIDRDNF NGVLKGIKPR LTYRVDNTLA KNGTQLGVEL NFNSMEDFEP QNVVKQVEPL
RKLLEVRNKL ADLRNKMGGN DKLEELLMDV LQNTEKLKTL GKEFGREAAV PAADGKE
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