Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2508 |
Symbol | |
ID | 6111461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 2789573 |
End bp | 2790055 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641622303 |
Product | type VI secretion system lysozyme-related protein |
Protein accession | YP_001749377 |
Protein GI | 170721689 |
COG category | [S] Function unknown |
COG ID | [COG3518] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03357] type VI secretion system lysozyme-related protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0785456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAATC AGGCCCGCCT GCTGCCCTCG CTGCTCGACC GGCTGCTGGA CGACCGTCCG TTTCAGTCGG CCGAGCCGGC TGTGCAGCGC ACCTGCTCGC TGGCCGAATA CAAGGCCAGC ATCGTGCGCG ACCTGGAGGT GCTGGTGAAT ACCCGCCAGT CCCTGGTCGC CGAGCAGATC GAAGGTTTCA GCCAGCTCGG TGGCTCCATC CTTGAATACG GCATGCCCGA CTTCATCAGC CGCAGCGTGC TCGACCCGCA CGACCGGCGG CTGATCCAGC AACAGCTGGA GCGCGCGATC AGTACCGGCG ACCGGCGTTT TCGCCGGGTG CGCGTACAGC TGCTGGCCCA GCAGAACGGC CATCGCATGT TGACCTTCCG CGTGGACGCC GTGTTGCGTC TGCAGGACAT CAGCCGCCAG GTGTCGTTTG ACGCCGTGCT GCAGGTCAAC ACCCAGGAAT ACAAAGTGCA GAACCTCAAC TGA
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Protein sequence | MSNQARLLPS LLDRLLDDRP FQSAEPAVQR TCSLAEYKAS IVRDLEVLVN TRQSLVAEQI EGFSQLGGSI LEYGMPDFIS RSVLDPHDRR LIQQQLERAI STGDRRFRRV RVQLLAQQNG HRMLTFRVDA VLRLQDISRQ VSFDAVLQVN TQEYKVQNLN
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