Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2505 |
Symbol | |
ID | 6111458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 2784125 |
End bp | 2786722 |
Gene Length | 2598 bp |
Protein Length | 865 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641622300 |
Product | type VI secretion ATPase |
Protein accession | YP_001749374 |
Protein GI | 170721686 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.58674 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCTGA AGTCTCTGTT CGCCAAGCTT AACGAAACCA GCCGCACGGC CACTGAAAGC GCGGCGGCCC TGTGCCTGTC GGAGCACCAC TACGACGTCG AGGTGGAACA CCTGCTGCTG CAGTTGCTGG ACAACAGCGA CAGTGACCTG CCGCTGATCC TGCGCCACTA CGACGTGGTC GCCGAGCGCC TGCAGGCGCA ACTGGTGACC GCCCTGGGTA CCTTCAAGAA GGGCAACACC CGCACCCCGG CGCTGTCCCC GCACATCACC CGCATGATCG AGCAGGCATG GGTACTGGCC TCGATCGAGT ATGGTGTGGG CCAGGTGCGC AGTGCGCACC TGTTGCAAGC ATTGCTCGAC GACGCCGAAC TGCGCCGGGT GGTCATCGCC TCCGCACCGG AGCTTGAGAA GATCAACGCC GACGACCTGC GCCTGAACCT CAGCGCACTG GTCGAAGGCA GTGCCGAATC CCGGCTCGCC AGCCCTCTGG CCAGCCCCTC GGCGCCAGTG GCAGGCGCCG GCAAGGTTGG CGGCAAGACC CCGGCCCTGG ACCAGTACAC CGTCAACCTC ACACAAAGCG CCCGTGACGG CCGGATCGAC CCGGTGCTTG GCCGCGAGTT CGAAGTGCGG CAGATGGTCG ACATCCTCAC CCGTCGCCGC CAGAACAACC CGATCCTCAC CGGCGAAGCC GGCGTCGGCA AGACCGCAGT GGTCGAAGGC CTGGCCTTGC GCATCGCCCA GGGCGATGTG CCAGCCCCAC TCAAGGACGT CGCCGTGCAC ACCCTCGACC TGGGCCTGCT GCAGGCGGGT GCCGGGGTCA AGGGCGAGTT CGAAAACCGC CTCAAAGCGG TGATCGAAGA GGTCAAGCGC AGCCTGCACC CGATCATCCT GTTCATCGAC GAAGCCCACA CCCTGATCGG CTCCGGTGGC CAGGCCGGGC AGAACGATGC CGCGAACCTG CTCAAGCCAG CCCTGGCCCG TGGCGAGCTG CGCACCATCG CTGCCACCAC CTGGGCCGAA TACAAGAAGT ACTTCGAAAA AGACGCCGCC CTCGCCCGTC GCTTCCAGGT AGTCAAGGTC GAAGAGCCTG ACGAAGACAA GGCCATCCAC ATGCTGCGCG GCCTGCTCGG CAAGATGCGC GAGCACCACA AGGTGGCGGT GATGGACGAA GCACTGGTAC AGGCCGTGCG CCTGTCCAAC CGCTACATCA CCGGCCGCCA GCTGCCCGAC AAGGCGGTCA GCGTGCTCGA TACCGCCTGC GCACGCATCG CCTTGGCGCA GTCGTCGCAA CCCGGCGCGC TGGAAGACTG CCGCCGCCAT ATCGACAACC TGCAGGCCGA AATCGCCGTG CTCGACCACG AAGCCGGCAA GGGCCACGAC CATGCCCGGC GCCTTGCCGA GCTGCAGGCC GCCCTGCAGG CCGAGCAGTC GCACGAACAG CGCCTGAGCG CCCAGTGGCA GCAGGAGCTG GGCCTGGTCG AGCAACTCAA AGCCCTGGAC AGCGCCAAGG ACACCGACGC CGCCCAGCTC AACGCCCTGC GCGCCGAGCT GAGCGCCGTC CAGGGCGACC AGCCCCTGGT CCACGCCTTG GTCGATGCCG GCGCCATCGC CCAGGTGATC AGCGGCTGGA CCGGTATCCC GCTGGGCAAG ATGCTGCGTG ACGAGATCGA CACCGTGCAG CGCCTGCCTG CGCTGCTCGG TGAACGCGTG CTGGGCCAGG ACCACGCGCT GCACGAAATC GGCAAGCGCA TCAAGATTTC CCGCGCCCGC ATGGAAGACC CAAACAAACC GATCGGCGTG TTCCTGCTGC TGGGCCCCAG CGGCGTCGGC AAGACCGAAA CCGCGCTGGC ATTGGCCGAC ACCCTGTACG GCGGTGAGCG CAACCTGATC ACCATCAACA TGTCCGAGTA CCAGGAGGCC CACACCGTAT CGAGCCTCAA AGGCTCGCCA CCCGGCTACG TCGGTTACGG CGAAGGCGGC GTGCTGACCG AGGCCGTGCG CCGCAAGCCC TACAGCGTGG TGCTGCTCGA CGAGGTGGAG AAGGCCCACC CCGACGTGCT CGAGCTGTTC TTCCAGGTGT TCGACAAAGG CGTGCTGGAC GACGGCGAAG GCCGCGAGAT CAACTTCCGC AACACGGTGA TCATCCTCAC GTCCAACACC GGCACCGAGC GCATCATGCA GACCTGCCTG AATGCCCAGA CGCTGCCTAC CCCCGAGGCC ATCGTCGAAG GCCTGCGCGA CGAGCTGAAC CACGTCTTCA AACCGGCCTT CCTCGGCCGC CTGAGCATCG TGCCGTTCTA CCCGGTGCAG GACCAGATCC TCGAGCGCAT CGTTGCCCTC AAGCTCGAGC GTATCGCCAA ACGTTTCGCC CGCAACCACC AGGCTGAGCT GAGCTACGAC GACGCCCTGG TCAAGGCCAT CGCGGCACGT TGCACCGAGG TCGACAGCGG CGCACGCAAC ATCGACAACA TCCTGTCCCG CACCCTGATG CCCGAGCTTG CCCAGCACGT TCTCGAGCGC ATGGCCCAGG ACGCGCCGAT CGAGCGCTTG ACGATCGAGC TGGGCAGCGA TGGCGATTTC GCCTATCGCC TGGCCTGA
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Protein sequence | MNLKSLFAKL NETSRTATES AAALCLSEHH YDVEVEHLLL QLLDNSDSDL PLILRHYDVV AERLQAQLVT ALGTFKKGNT RTPALSPHIT RMIEQAWVLA SIEYGVGQVR SAHLLQALLD DAELRRVVIA SAPELEKINA DDLRLNLSAL VEGSAESRLA SPLASPSAPV AGAGKVGGKT PALDQYTVNL TQSARDGRID PVLGREFEVR QMVDILTRRR QNNPILTGEA GVGKTAVVEG LALRIAQGDV PAPLKDVAVH TLDLGLLQAG AGVKGEFENR LKAVIEEVKR SLHPIILFID EAHTLIGSGG QAGQNDAANL LKPALARGEL RTIAATTWAE YKKYFEKDAA LARRFQVVKV EEPDEDKAIH MLRGLLGKMR EHHKVAVMDE ALVQAVRLSN RYITGRQLPD KAVSVLDTAC ARIALAQSSQ PGALEDCRRH IDNLQAEIAV LDHEAGKGHD HARRLAELQA ALQAEQSHEQ RLSAQWQQEL GLVEQLKALD SAKDTDAAQL NALRAELSAV QGDQPLVHAL VDAGAIAQVI SGWTGIPLGK MLRDEIDTVQ RLPALLGERV LGQDHALHEI GKRIKISRAR MEDPNKPIGV FLLLGPSGVG KTETALALAD TLYGGERNLI TINMSEYQEA HTVSSLKGSP PGYVGYGEGG VLTEAVRRKP YSVVLLDEVE KAHPDVLELF FQVFDKGVLD DGEGREINFR NTVIILTSNT GTERIMQTCL NAQTLPTPEA IVEGLRDELN HVFKPAFLGR LSIVPFYPVQ DQILERIVAL KLERIAKRFA RNHQAELSYD DALVKAIAAR CTEVDSGARN IDNILSRTLM PELAQHVLER MAQDAPIERL TIELGSDGDF AYRLA
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