| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2447 |
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| Symbol | |
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| ID | 6111400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2718844 |
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| End bp | 2722023 |
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| Gene Length | 3180 bp |
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| Protein Length | 1059 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641622242 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001749316 |
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| Protein GI | 170721628 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTTT CGAAATTCTT CATTACCCGG CCGATCTTCG CTGCGGTGCT GTCGCTGGTG
CTGCTGATCG CGGGTTCCAT CTCGCTGTTC CAGTTGCCGA TCAGTGAATA CCCGGAAGTA
GTGCCGCCTA CCGTGGTGGT GCGCGCCAAC TTCCCGGGCG CCAACCCCAA AGTTATCGGC
GAAACCGTCG CCGCACCGCT GGAGCAGGCC ATCACCGGTG TCGAGAACAT GTTGTACATG
TCCTCGCAAT CCACCGCCGA CGGCAAGCTC ACCCTGACCA TCACCTTCGC CCTGGGCACC
GACCTGGACA ACGCGCAGGT TCAGGTCCAG AACCGTGTCA CGCGCACCCA GCCCAAGCTG
CCGGAAGAAG TGACCCGTAT CGGTATCACC GTCGACAAGG CTTCACCCGA CCTGACCATG
GTGGTGCACC TGACTTCGCC GGACAATCGC TACGACATGC TCTACCTGTC CAACTACGCC
ATCCTCAACA TCAAGGACGA GCTGGCACGC CTGGGCGGCG TGGGTGATGT GCAACTGTTC
GGCATGGGCG ACTACTCGCT GCGGGTGTGG CTCGACCCGA ACAAGACCGC TTCGCGCAAC
CTGACCGCCG GTGACGTGGT CGCGGCCATC CGCGAGCAGA ACCGCCAGGT TGCCGCGGGC
CAGCTGGGTG CCCCGCCCGC CCCCGGCTCG ACAAGCTTCC AGCTGTCGAT CAACACCCAG
GGCCGGCTGG TGAACGAGGA AGAGTTCGAG AACATCATCA TCCGCGCCGG TGCCGATGGC
GAAATCACTC GCCTGAAGGA CATCGCCCGG GTCGAGCTCG GCTCCAGCCA GTACGCCCTG
CGTTCGTTGC TGAACAACCA GCCGGCGGTG GCCATTCCGA TCTTCCAACG CCCCGGTTCC
AACGCCATCG AGATCTCCGA CGAAGTGCGG GCGAAGATGG CCGAGCTGAA GAAAGACTTC
CCTGAAGGCA TGGACTACAG CATCGTCTAT GACCCGACCA TCTTCGTGCG CGGCTCCATC
GAAGCAGTGG TGCACACCCT GTTCGAAGCG CTGGTGCTGG TGGTGCTGGT GGTGATCCTG
TTCCTGCAGA CATGGCGCGC CTCGATCATC CCGCTACTGG CTGTGCCGGT GTCGCTGATC
GGGACCTTCG CGGTGATGCA CCTGTTCGGT TTCTCGCTCA ACGCCCTGTC GCTGTTCGGC
CTGGTATTGG CCATCGGTAT CGTGGTGGAC GACGCCATCG TCGTGGTGGA GAACGTCGAA
CGCAATATCG GGCTAGGCCT CAAACCGCTG GAAGCCACGC AAAAGGCGAT GGGCGAAGTG
ACCGGGCCGA TCATCGCCAC CGCCCTGGTG CTGTGCGCAG TGTTCGTGCC CGCCGCGTTC
ATCTCCGGCC TTACCGGGCA GTTTTACAAA CAGTTCGCCC TGACCATCGC CATCTCGACC
GTGATTTCGG CTTTCAACTC GCTGACCCTG TCGCCAGCCC TGGCCGCAGT GCTGCTCAAG
GACCACCACG CACCCAAAGA CCGTTTCTCG CGGCTGCTGG AAAAACTGCT GGGCAGCTGG
CTGTTCGCCC CGTTCAACCG CTTCTTCGAC CGCGCCAGCC ACAGTTACGT CGGTGGTGTG
CGCCGGGTCA TCCGCTCCAG CGGCATCGCC CTGTTCGTTT ATGCCGGCCT GATGGGCCTG
ACCTATCTGG GCTTCTCGTC CACCCCGACC GGCTTCGTGC CGGCCCAGGA CAAGCAGTAC
CTGGTGGCGT TCGCCCAGTT GCCTGACGCC GCCAGCCTCG ACCGCACCGA GGCGGTGATC
AAGCGCATGA GCGAAATCGC CCTGAAGCAA CCTGGCGTGG CCGACTCGGT AGCCTTCCCG
GGCCTGTCGA TCAACGGTTT CACCAACAGC CCCAACAGCG GCATCGTGTT CACCCCGCTC
AAGCCGTTCG ATGAGCGCAA GGACCCGAGC CAGTCGGCAG CGGCCATTGC CGCCGCCTTG
AACGCCCAGT TCGCCGACAT CCAGGATGCC TACATCGCGA TCTTTCCCCC ACCGCCGGTA
CAAGGCCTGG GCACCATCGG CGGCTTCCGC CTGCAGATCG AGGACCGCGG CAACCTGGGC
TACGAAGCGC TGTACAAGGA AACCCAGAAC ATCATCGCCA AGAGCCACAA CGTACCGGAG
CTGGCAGGCC TGTTCACCAG CTACCAGGTG AACGTGCCCC AGGTAGATGC GGCCATCGAC
CGGGAAAAGG CCAAGACCCA CGGCGTGGCG ATCACCGACA TCTTCGACAC CCTGCAGGTT
TACCTGGGTT CGCTGTACAC CAACGACTTC AACCGCTTTG GCCGCACCTA CCAGGTCAAC
GTCCAGGCTG AGCAGCAGTT CCGCCTCGAT GCCGAGCAGA TCGGCCAGTT GAAGGTGCGC
AACAACCTGG GCGAGATGAT CCCGCTGGCG ACCTTCCTGA AGGTCAGCGA CACCTCCGGG
CCTGATCGCG TGATGCACTA CAACGGCTTC ATCACCGCGG AAATCAACGG TGCGGCAGCC
CCGGGCTACA GCTCCGGCCA GGCCGAAGCC GCGATCGAGA AACTGCTGAA CGAGGAACTG
CCCAACGGCA TGACCTTTGA GTGGACCGAC CTGACCTACC AGCAGATCCT CTCCGGCAAT
ACCGCTCTGC TGGTGTTCCC GCTGTGCGTG CTGCTGGCGT TCCTGGTGCT GGCGGCCCAA
TACGAAAGCT GGAGCCTGCC GCTGGCGGTG ATCCTGATCG TGCCGATGAC CCTGCTGTCA
GCAATCACCG GGGTGATCGT CTCCGGTGGC GACAACAACA TCTTCACCCA GATCGGTTTG
ATCGTACTGG TGGGCCTGGC GTGCAAGAAC GCCATCCTGA TCGTCGAGTT CGCCAAGGAC
GAGCAAGCCA AGGGCCTCGA CCCGCTGGCT GCGGTGCTGG AAGCCTGCCG CCTGCGCCTG
CGGCCGATCC TGATGACCTC GATCGCGTTC ATCATGGGCG TGGTACCGCT GGTGTTCTCC
TCCGGTGCCG GCTCGGAAAT GCGCCATGCG ATGGGTGTAG CGGTGTTCTC GGGGATGATC
GGCGTGACCG TGTTCGGCCT GTTCCTGACA CCGGTGTTCT TCTTCCTGAT TCGCCGTTTC
GTCGAACGTC GCCAGGCCCG CAAGGCCGAA CGCGTTCAAT CGCTGGAGAA CCACGCATGA
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| Protein sequence | MNFSKFFITR PIFAAVLSLV LLIAGSISLF QLPISEYPEV VPPTVVVRAN FPGANPKVIG
ETVAAPLEQA ITGVENMLYM SSQSTADGKL TLTITFALGT DLDNAQVQVQ NRVTRTQPKL
PEEVTRIGIT VDKASPDLTM VVHLTSPDNR YDMLYLSNYA ILNIKDELAR LGGVGDVQLF
GMGDYSLRVW LDPNKTASRN LTAGDVVAAI REQNRQVAAG QLGAPPAPGS TSFQLSINTQ
GRLVNEEEFE NIIIRAGADG EITRLKDIAR VELGSSQYAL RSLLNNQPAV AIPIFQRPGS
NAIEISDEVR AKMAELKKDF PEGMDYSIVY DPTIFVRGSI EAVVHTLFEA LVLVVLVVIL
FLQTWRASII PLLAVPVSLI GTFAVMHLFG FSLNALSLFG LVLAIGIVVD DAIVVVENVE
RNIGLGLKPL EATQKAMGEV TGPIIATALV LCAVFVPAAF ISGLTGQFYK QFALTIAIST
VISAFNSLTL SPALAAVLLK DHHAPKDRFS RLLEKLLGSW LFAPFNRFFD RASHSYVGGV
RRVIRSSGIA LFVYAGLMGL TYLGFSSTPT GFVPAQDKQY LVAFAQLPDA ASLDRTEAVI
KRMSEIALKQ PGVADSVAFP GLSINGFTNS PNSGIVFTPL KPFDERKDPS QSAAAIAAAL
NAQFADIQDA YIAIFPPPPV QGLGTIGGFR LQIEDRGNLG YEALYKETQN IIAKSHNVPE
LAGLFTSYQV NVPQVDAAID REKAKTHGVA ITDIFDTLQV YLGSLYTNDF NRFGRTYQVN
VQAEQQFRLD AEQIGQLKVR NNLGEMIPLA TFLKVSDTSG PDRVMHYNGF ITAEINGAAA
PGYSSGQAEA AIEKLLNEEL PNGMTFEWTD LTYQQILSGN TALLVFPLCV LLAFLVLAAQ
YESWSLPLAV ILIVPMTLLS AITGVIVSGG DNNIFTQIGL IVLVGLACKN AILIVEFAKD
EQAKGLDPLA AVLEACRLRL RPILMTSIAF IMGVVPLVFS SGAGSEMRHA MGVAVFSGMI
GVTVFGLFLT PVFFFLIRRF VERRQARKAE RVQSLENHA
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