Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2444 |
Symbol | |
ID | 6111397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 2714470 |
End bp | 2716149 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641622239 |
Product | histidine kinase |
Protein accession | YP_001749313 |
Protein GI | 170721625 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.682084 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTCCAGT GGGTATCGGC CCATTCACGG CTTGGCCAGG CATGGCAGCC CTTAAGGAGA ATCACATTGG CCAGGTCGCT GTCACTCGAC GAACGTGCCT TGATTCTGGC ACCCAGGCAA CTTGCCACGC ACGCCTCGAC GTTTCTGACG AGCGCTGGCA TCGATTGCCT GTGTTCGCGT GACATGGCCC ACCTGCAGGA CGGACTTGGC AGTGGCGCAG GCTTGGTGGT CATCGACGAA CACATGCTCA ACAGCAGCCA AAGCGGACTG TTGCAGGATT TCATCGACCA ACAACCGCCC TGGTCGGACT TGCCCATCGT ACTGCTCACG CAAACCCCGC AACCGTCAGC CAGCCCCTGC ACGCCCGCCG ACCATCCACT GGGCAACCTG ACGCTGCTGG CCATTCCGTT CGAAAATGAG CAGCTACTGG AGCTGATCAA GGTGGCACTT CGTCACCGTC GCCGCCAGTA CCTGGCGCGC GACCAGTTAC TTGACCTGCA GCAACGCCTG GAGGCTCACA GCGAGGCACA GCAAAGCACG GAGCAAGCGC GGCACCAGAC CCGCAAGATG GACGCCATCG GGCAATTGGC CGGCGGTGTG GCACACGACT TCAACAACTT GCTGACCAGC ATCGGGGGCA GTTTCGAACT GATCGACAGA CGGTTGAAAC AGGGCAGCAC CAAGGGGGTG GAAAGCTTGC TGCACAGGGG GCAGGAGGCC GTTTCGCGTG CAGCGCGCCT TACCCATCGG TTATTGGCGT TCTCATCCAG ACAGTCGCTG CAGAGCCGTC GCATCGACCT GCAGGCAATG CTACAGCCAA AACGGCTGGA GGCCGCACTG CAACACGGCG TGATACTGCA ACTGACAGTG CCCCAAAACA CCTGGCCAGT GGCCGGCGAC GACACACAAT TGCAAGAAGC CGTGGACAAC CTGCTGCTCA ATGCCTGCGA AGCCATGCCC AACGGCGGGA AGGTGCGTGT CGAAGCCAGC AATCGAAAGG TAACGGCGAG GCAGTTTGCC GATGGCAGCC TGGCGGTGGG CGACTATACG TGCCTGAGCG TCACTGACGA AGGCCAAGGC ATGTCACAGA GCACACTCGA ACATGCCTTC GAGCCATTCT TCAGCACCAA ACCGGTGGGC CAAGGTATCG GTCTGGGCCT TTCGATGGTC TACGGCTTCA GCAAACAGTC CCAAGGGCAT GTGGTACTGC ATAGCCAGAT AGGCCAAGGC ACCCGCGTGG ACCTTTACCT GCCGCGACAC CTGGAGCAAG AACAAGCGCA GGCTCCCGCA GCGCCACCAC TTTCACGGCG TAGCGGCCGC ACGATCCTGG TGGTCGAAGA TGACCCGGAT GTGCGCCAGC TTTTGTGCCA GACCCTTAAG GAGCAGGGTT TCCCGTACCG CAGTGCGTGC AATGCCAGTG AGGCCCTGCA AATATTGCGA TCCTCTGAGG CAATCGACCT GCTGGTCAGT GACGTAGGCC TTCCGGGCAT GAACGGGCGG CAATTGGCAG AAATCGCCCG TACCTTGCAC CCGCATCTGC CCATATTGTT CATCACCGGC TACACCGAAA CGGCAATGGC ACGGGAGGGT TTTCTCGGGG CAGGCATGCA ATTGATGTGC AAACCATTCG AACTGGCGCA ATTTCATGCC CGAGTGATGC AGATTCTAGG TGAGGCCTGA
|
Protein sequence | MVQWVSAHSR LGQAWQPLRR ITLARSLSLD ERALILAPRQ LATHASTFLT SAGIDCLCSR DMAHLQDGLG SGAGLVVIDE HMLNSSQSGL LQDFIDQQPP WSDLPIVLLT QTPQPSASPC TPADHPLGNL TLLAIPFENE QLLELIKVAL RHRRRQYLAR DQLLDLQQRL EAHSEAQQST EQARHQTRKM DAIGQLAGGV AHDFNNLLTS IGGSFELIDR RLKQGSTKGV ESLLHRGQEA VSRAARLTHR LLAFSSRQSL QSRRIDLQAM LQPKRLEAAL QHGVILQLTV PQNTWPVAGD DTQLQEAVDN LLLNACEAMP NGGKVRVEAS NRKVTARQFA DGSLAVGDYT CLSVTDEGQG MSQSTLEHAF EPFFSTKPVG QGIGLGLSMV YGFSKQSQGH VVLHSQIGQG TRVDLYLPRH LEQEQAQAPA APPLSRRSGR TILVVEDDPD VRQLLCQTLK EQGFPYRSAC NASEALQILR SSEAIDLLVS DVGLPGMNGR QLAEIARTLH PHLPILFITG YTETAMAREG FLGAGMQLMC KPFELAQFHA RVMQILGEA
|
| |