Gene PputW619_2442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_2442 
Symbol 
ID6111395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2711513 
End bp2712196 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content55% 
IMG OID641622237 
ProductThiJ/PfpI domain-containing protein 
Protein accessionYP_001749311 
Protein GI170721623 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.197595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA AAATTCTGGT GGTACTGACC AATACCGCCA AATATCCGAC CCTGAATCGC 
GCAACCGGTT TATGGCTGGG TGAAGCTGTG CATTTTGTAG AGACGGTTCA GCAAGCTGGT
TATACAGTAG ACTACGTCAG CCCCGGAGGC GGCTACGTGC CAATCGATCC GCACAGCTTG
CAGATGGCGC CCGAGATGGA TTGGAACTAC TACAACGACA AGGGTTTCAT GAACCGCCTG
GGCGCCTCGC TAAGCCCCGG CCAGGTCACG GCAGACGAAT ACTGTGCCAT CTATTACACC
GGTGGCCATG GCGTGATGTG GGACTTCCCT GACAACCCGC AATTGCAGGA GCTGGCGCGC
AGGATATACG AGAAGAACGG CGTGGTGGCG GCTGTCTGCC ACGGCGTCGC AGGGCTGCTT
AACATCAAAC TCAGTGATAA CAAGCTGCTG CTCAAGGATC GCCAGGTCAC CGGTTTTTCA
AATACCGAAG AAAAGCTTGC CGAACTTGAG GAGGTGGTGC CTTTTCTCAC CGAGAACGAA
CTGGGCGCGC GAGGGGGCAG TTACAGCAAG CATGATGATC CCTGGAAGCC CTTTGTTGTC
TGTGATGGCC GCCTGATCAC AGGACAAAAC CCCGCCTCTA CGCGTTTACT GGCAGAAAAA
GTAGTTCAGA CGCTCAACCC GTAA
 
Protein sequence
MSKKILVVLT NTAKYPTLNR ATGLWLGEAV HFVETVQQAG YTVDYVSPGG GYVPIDPHSL 
QMAPEMDWNY YNDKGFMNRL GASLSPGQVT ADEYCAIYYT GGHGVMWDFP DNPQLQELAR
RIYEKNGVVA AVCHGVAGLL NIKLSDNKLL LKDRQVTGFS NTEEKLAELE EVVPFLTENE
LGARGGSYSK HDDPWKPFVV CDGRLITGQN PASTRLLAEK VVQTLNP