Gene PputW619_2422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_2422 
Symbol 
ID6111375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2689453 
End bp2691051 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content62% 
IMG OID641622217 
Productdiguanylate cyclase 
Protein accessionYP_001749291 
Protein GI170721603 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.257185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGC GCTTGCCCAT GTTCCACCTA CGAACCCTGG TTGTCGGCAT TGTCGTGCTG 
GCGTGCCTGG CAACCCTGTG CAACACCCTC GCTGTCGCCT ACCGGGTACA GCACCACGCC
TTGGTAGACC TTGAGCTGAA GGCCAACCAA GCCTATGCGA GCAAACTGGC ATCGGATATC
AACGAGTTCC TGCGCTCGGC ACGCAACCAC CTGTCCTACG CCGCCCGGCA ACTGGACGGT
GGCCTGGACG ACATGACCAT GCTGAAAAGG GAAGCCAAGC GACTGCAGGT GCAGGACAAG
GACTTCAACT CCATCGTCAT CGTCAACGCC CAAGGCCAGG TGCTGGTGGC TCATCCGAAC
ACAGAGCAGA TCACCAGCCA CCACCAGCAC TCCAGCGAAA TCCGCCAAGC CGTGCAAGCC
CGTCAGCCGT GGGTCAGTTC CGCCTACACC TCGCGCGGGG GCGAGCTGGT GATATTCGTT
TCGCAGCCGA TCTTTGCCGC CGATGGCCGT TACCTGGGCA TTGTCGGCGG TTCGGTGTTT
CTCAAAAAAG AAAGCGCACT GCATACGTTG ATTGGCCTTC ACTACCAACA GGACGGTACC
TTCGCTTTCG TCGCCGACGG CAATGGACGC CTGCTGCACC ACCCCGACCA TGCGCGCATT
GGCACCCAGG TCAGCAGCAG CCCGACGATC AGCGCGGCCT TGCGTGGCGA GGCAGGCACC
CTTGAAGTGC CCAACTATAT TGGCGTTCCC ATGCTCGCAG GCTTTGCCCC GGTGCCTGAA
GCGCACTGGG CAGTGGTGGT CCAGACACCG CGGGATCTGG CCTTGGCACC ACTGGGCGAA
ATGACCCGCA AGGTGCTGCT TTATATACTG CCGGTCAGCA TTATCGGCTT GCTGTTGATG
CTATGGATGA CCTACCGCCT GACCTTGCCG TTACGCCAAC TGGCGCACAG CGCCAGTCAC
CTGTCCGCCA CCCAGACCGG CGAACAGCTG CGCCGTATCG ACGCGTGGTA CGTAGAGGTC
GCAGCCATCC GCCGCGCCTT GCTGACAGGC GAGCAATTGC TGCAAGAAAA ATTCGGCAAG
CTGCGCCAGC AGGCTCAGAG TGATGCCCTC ACCGGCCTTG CCAACCGGCG TGCCATGCAA
CTGGCGCTGG ACGCCTTGAT GCAAAGCTCA AGAGCATTCG CCGTGCTGGC CCTGGACATC
GACCACTTCA AACGGGTCAA CGATACCTTT GGCCACGATG CTGGCGACGA GGTGCTCAAA
CACCTCGCCG AGCTGCTGCG TCACAATTCA CGCCAGGATG ACCTGCCCTG CCGGGTCGGT
GGCGAGGAGT TCACCATGCT GCTGCCCGAC ACTGGCCTGG CCGATGCCCG GCGCATTGCC
GAACGGATAC GCAGCGCGGT CGAACAGGCC GATTCACCCC ATGTGGGCAA GCTTACCGTG
TCGATTGGCG TAGCCTGCCG CCGGCCCGAT ACACAACAGG CCGGCAGCGT GCTCAAGCAA
GCCGACGAGC AGCTGTACAA GGCTAAACAC AACGGCCGCA ACCGGGTCGA AGTGCTTGAC
CTCAGCCCCT CACCCCCAGC ATTCCCCGCT CGACGATGA
 
Protein sequence
MLKRLPMFHL RTLVVGIVVL ACLATLCNTL AVAYRVQHHA LVDLELKANQ AYASKLASDI 
NEFLRSARNH LSYAARQLDG GLDDMTMLKR EAKRLQVQDK DFNSIVIVNA QGQVLVAHPN
TEQITSHHQH SSEIRQAVQA RQPWVSSAYT SRGGELVIFV SQPIFAADGR YLGIVGGSVF
LKKESALHTL IGLHYQQDGT FAFVADGNGR LLHHPDHARI GTQVSSSPTI SAALRGEAGT
LEVPNYIGVP MLAGFAPVPE AHWAVVVQTP RDLALAPLGE MTRKVLLYIL PVSIIGLLLM
LWMTYRLTLP LRQLAHSASH LSATQTGEQL RRIDAWYVEV AAIRRALLTG EQLLQEKFGK
LRQQAQSDAL TGLANRRAMQ LALDALMQSS RAFAVLALDI DHFKRVNDTF GHDAGDEVLK
HLAELLRHNS RQDDLPCRVG GEEFTMLLPD TGLADARRIA ERIRSAVEQA DSPHVGKLTV
SIGVACRRPD TQQAGSVLKQ ADEQLYKAKH NGRNRVEVLD LSPSPPAFPA RR