| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2375 |
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| Symbol | |
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| ID | 6111328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2645966 |
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| End bp | 2647021 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641622170 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001749244 |
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| Protein GI | 170721556 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.229949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATA TCGCAGGGCA ACTTGACCCT CCCCTGTTAC CCGTCGACCA GCCTCGGGTA
GTGGTTTTCG TTGCCTACCC CGCCATGGGC CTGCTCGACC TCAGCGGCGC GCAAACCGTG
TTCTGGGCAG CCACCAAGGC CATGGCCGAG CGCGGTCTGC CCGGCTACCG CCTACATACC
GCCAGCCTCG ACGGTGGCCT CCAGCCAACC GCCGAAGGCC TGGTGGTGGC CACCGAGCGC
CTGGATGACG CCATGGCCCA GGCCGTCGAC ACACTGATCG TACCCGGCGC GCCGGACATC
ATCCGTAGCC TTCCCCAGCA CGGCCCACTG GTGGCCTGGC TGCGCCGCGC CAGCCTGCAC
GCCAGGCGTA CGGCGTCTGT CTGCAGCGGC ACTTTCCTGC TGGCCAGCGC CGGCCTGCTC
GACGGCCGGC GCGCTGCCAC CCACTGGGCC ATGTGCGAGG CGTTGCGCCG TGACTTCCCG
GCCGTGCAGG TGGACCACGA ATCGATCTTC GTTCAGCAAG GCACCGTGTG GACCTCGGCG
GGTGTGAGTG CAGGGATCGA CCTGGCCCTG GCGCTGGTCG AAATGGACTG CGGCCGCGAC
GTCGCGATGC AGGTGGCGCG CGAACTGGTG GTGTTTCTCA AGCGCCCGGG CGGCCAGGCG
CAGTTCAGCG AATTGCTCAA GCTGCAAGGC CAGCAGAGCG CGGAGTTCGA AGCCCTGCAC
CTGTGGCTCA ATGAGCACTT GGGCGACCCA CGCCTGAGCG TCGAGCGCCT GGCCGAACAG
GCGCATATGA GCCTGCGCAA TTTCACCCGG GTGTACAAAC TGAAGACCGG CCGCACACCG
GCCAAGGCGA TCGAGGTGTT CCGCCTGGAA GCGGCCCGGC GCCAGCTGGA AAACACCGAT
AGCCACATCG AGCAGGTCGC CCGCCTGTGC GGCTTCGGTA GCGAAGAACG CATGCGCCTG
GCCTTCCAAC GCCACCTGGC TGTCACCCCG CGCGACTACC GTGCACGCTT CGCCCGCAGC
GTGCCGCTGG CCGAAATTCA GGGTTCTTTG GCCTAG
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| Protein sequence | MTDIAGQLDP PLLPVDQPRV VVFVAYPAMG LLDLSGAQTV FWAATKAMAE RGLPGYRLHT
ASLDGGLQPT AEGLVVATER LDDAMAQAVD TLIVPGAPDI IRSLPQHGPL VAWLRRASLH
ARRTASVCSG TFLLASAGLL DGRRAATHWA MCEALRRDFP AVQVDHESIF VQQGTVWTSA
GVSAGIDLAL ALVEMDCGRD VAMQVARELV VFLKRPGGQA QFSELLKLQG QQSAEFEALH
LWLNEHLGDP RLSVERLAEQ AHMSLRNFTR VYKLKTGRTP AKAIEVFRLE AARRQLENTD
SHIEQVARLC GFGSEERMRL AFQRHLAVTP RDYRARFARS VPLAEIQGSL A
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