Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2296 |
Symbol | |
ID | 6111249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 2568711 |
End bp | 2569082 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641622091 |
Product | 4-carboxymuconolactone decarboxylase |
Protein accession | YP_001749165 |
Protein GI | 170721477 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | [TIGR02425] 4-carboxymuconolactone decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0265397 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.659303 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAGG AATTGTTTGA ACGCGGGCTG CAGACCCGTC GTGAAGTGTT AGGCGACGCC TACGTGGACG CCGCCCTGGC CAACGCTGAT GAGTTCGGCA TGCCGATGCA GGAACTGGTG TCGCAATACT GCTGGGGCGA TGTATGGAAC CGACCGGGCC TGGACCGGCG CACCCGTAGC CTGCTCAACC TGGCCTTCAT GACTGCGCTT AACCGGCCTC ATGAGCTTAA GCTTCACATT CGTGGTGCGC TGAATAATGG GGTGAGCAAG GAGGAAATCC GCGAGGTGTT CCTGCAGGCG GCGATCTACG CAGGGGTGCC GGCGGCGGTG GACAGCTTCC GCTGTGCCCG TGAGGTGTTC CAGCAGGGTT GA
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Protein sequence | MNQELFERGL QTRREVLGDA YVDAALANAD EFGMPMQELV SQYCWGDVWN RPGLDRRTRS LLNLAFMTAL NRPHELKLHI RGALNNGVSK EEIREVFLQA AIYAGVPAAV DSFRCAREVF QQG
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