Gene PputW619_2296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_2296 
Symbol 
ID6111249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2568711 
End bp2569082 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content61% 
IMG OID641622091 
Product4-carboxymuconolactone decarboxylase 
Protein accessionYP_001749165 
Protein GI170721477 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR02425] 4-carboxymuconolactone decarboxylase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0265397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.659303 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAGG AATTGTTTGA ACGCGGGCTG CAGACCCGTC GTGAAGTGTT AGGCGACGCC 
TACGTGGACG CCGCCCTGGC CAACGCTGAT GAGTTCGGCA TGCCGATGCA GGAACTGGTG
TCGCAATACT GCTGGGGCGA TGTATGGAAC CGACCGGGCC TGGACCGGCG CACCCGTAGC
CTGCTCAACC TGGCCTTCAT GACTGCGCTT AACCGGCCTC ATGAGCTTAA GCTTCACATT
CGTGGTGCGC TGAATAATGG GGTGAGCAAG GAGGAAATCC GCGAGGTGTT CCTGCAGGCG
GCGATCTACG CAGGGGTGCC GGCGGCGGTG GACAGCTTCC GCTGTGCCCG TGAGGTGTTC
CAGCAGGGTT GA
 
Protein sequence
MNQELFERGL QTRREVLGDA YVDAALANAD EFGMPMQELV SQYCWGDVWN RPGLDRRTRS 
LLNLAFMTAL NRPHELKLHI RGALNNGVSK EEIREVFLQA AIYAGVPAAV DSFRCAREVF
QQG