| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2252 |
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| Symbol | |
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| ID | 6111205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2505675 |
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| End bp | 2507873 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641622047 |
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| Product | GAF sensor hybrid histidine kinase |
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| Protein accession | YP_001749121 |
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| Protein GI | 170721433 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0784] FOG: CheY-like receiver
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.535804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAGAG CACACATGGC TAAATGGCTA GACGGCGGCG GGCTGATGGC TGAACGCATT
CGCAATCACG ATTGGTCCAC TACCTCCCTG GGCCCGATCG AGACCTGGCC TGACGTACTC
AAGACCACCG TGGCCCTGTG TCTGGCCTCG CGCTTTCCCC AGGCAATTCT CTGGGGGCAA
GACCTGCTCA CTCTGCACAA CGACGCATTC CTGCCAATCC TTGGCAAAAA ACCGCAAGCG
CTGGGCAAGC CGTTTTGCGA AGTATGGCAG GAGGCCTGGG CCGACATCGC GGCTATGGTC
GAACGCGCCC TGGGTGGCGA AGCCGTCTAT ATCGAGGACT TCCCGCTGAC CATCGACCGC
AACGGCGGCC CGGAGCGAGC TTACTTCACC TTCTGCTACA GCCCTATCCG TGACCAGAAC
GGCGATGTGG TGGGCATGCT CGACACGGTC ACCGAAACGA CCGCCAGCGT GGTCACCAAT
CAGCGGCTGG CGTTTCTTGA CGACCTGGGC CGGGCTGTGG CGAATGCCAC CGATTCGGAC
CGAGTAATGG CCATCACCAC TGGCATGCTG TTGGAGCACC TGCAGTTGTC CAGTTGCGCC
TATGCCGTAA TGGAGGCCGA CCAAGATGGC TTCACTATCT GCGGCGACTC TGTCGCACCC
GGCTCCCCGC GGCTGCTGGG CCAGTATCGC CTGGCTGACT TCGGCCGCCT GGCGGTCAGC
CAACTGCGCA AGGGTCTGCC GCTGGTGATC AACGACAACC TGAGTGAGTT GGCCAGGGAA
GAAGCCGCCA CCTTCCAGGC CATTGGCATC ACTGCCACCA TTTGCATGCC ACTGGTCAAG
GGGGGCCGAC TCACCGCACT GATGGCCATC CACGATAAAA TGCCACGGCG ATGGACGGGC
TACGAACAGG CGCTGATCGG GGAAGTGACG GAACGTTGCT GGGCACATAT CCAGCGGGTC
CAGTCCCATG CCGAAATGCG TGAGGCGCTG GCTGCGCTAG AGTCACTCAA TGCCACCCTG
GAACACCGTG TCGAAGAACG CACTACCCAA TTGCTGCACA CCGAAGCCGT GCTGCGCCAG
GCCCAGAAGC TCGAAGCCAT AGGCCAGCTG ACCGGTGGCG TGGCCCATGA CTTCAACAAT
CTGCTGACCA TCATTCGCTC GTCACTGCAC TTCCTGCAAC GCCCCAACCT CGAAGACAGC
CGTCGCGAAC GCTACCTCAA GACCATTACC GACACGGTCG ACCGAGGCGC CAAGCTGACC
GGCCAGTTGC TGGCCTTCGC CCGCCGTCAG GCATTGAGCC CCCAAGTATT CGAAGCCCGA
TCGCGCCTGC AGGCCATGGC CGACATGCTT GATACCGCTA CGGGCGCGCG GATCCAGGTA
AAACTGGAGT TGCCGTCAAC GCCATGCCAC ATCCGCGCCG ACCTCAGCCA ACTGGAAACC
GCTGTGATCA ACCTGATGCT CAACGGCCGT GACGCCATGG CTGGCGAAGG CACCTTGCAC
CTGCGCCTGC TGCCCAACCA AAGCATGCCT GGCCTGCGCG AACAGCAAGA GCACCCAGGG
CCGTTTGCCG CCATCTCGGT GGTGGACAGC GGTGTCGGCA TCGCCGCCGA GTTGCTCGAC
CGTATCTTCG ACCCGTTCTT CACCACCAAG GCGCCCGGCG AAGGCACAGG GCTTGGACTG
TCGCAGGTGT TCGGCTTCGC CAAGCAATCC GGGGGCGATG TAGAGGTAGC CAGCATCCAG
GGCCAAGGGA CGACCTTCAC CCTGTACCTG CCACAGGTGG AACAGCCTGC CGAGCAGGCC
AATGCAGCCG CAGAGTTGAG CCAATCGCAG GTGAGTGGCG CGCGGCGAAG AATACTGGTG
GTAGAAGACA ACCCGGACCT TGGCACTTTC ACTGCACAGA TCCTCGAAGA CCACGGCTAC
CGGATCAGCT GGGTGAACTC TGCGGAAGAA GCCTTGATGG AGTTGAACGG CGCGGCGGGC
GACTTCGATG CCGTATTTTC CGATGTGGTC ATGCCCGGTA TGGGCGGCCT GGCCCTGGCC
CGCGAGCTAC GCCGCCAGTG CCCGCAATTG CCTGTGATAC TCACCTCCGG CTACAGCGAC
GCGATTGCCG AAGGCGGCCA CGAGGGATTC ACATTCCTGG CCAAGCCCTA CTCCGCCGAG
CAAGTATGCC TGCTGCTTGG GAAGGTGCTG GCGCCCTGA
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| Protein sequence | MGRAHMAKWL DGGGLMAERI RNHDWSTTSL GPIETWPDVL KTTVALCLAS RFPQAILWGQ
DLLTLHNDAF LPILGKKPQA LGKPFCEVWQ EAWADIAAMV ERALGGEAVY IEDFPLTIDR
NGGPERAYFT FCYSPIRDQN GDVVGMLDTV TETTASVVTN QRLAFLDDLG RAVANATDSD
RVMAITTGML LEHLQLSSCA YAVMEADQDG FTICGDSVAP GSPRLLGQYR LADFGRLAVS
QLRKGLPLVI NDNLSELARE EAATFQAIGI TATICMPLVK GGRLTALMAI HDKMPRRWTG
YEQALIGEVT ERCWAHIQRV QSHAEMREAL AALESLNATL EHRVEERTTQ LLHTEAVLRQ
AQKLEAIGQL TGGVAHDFNN LLTIIRSSLH FLQRPNLEDS RRERYLKTIT DTVDRGAKLT
GQLLAFARRQ ALSPQVFEAR SRLQAMADML DTATGARIQV KLELPSTPCH IRADLSQLET
AVINLMLNGR DAMAGEGTLH LRLLPNQSMP GLREQQEHPG PFAAISVVDS GVGIAAELLD
RIFDPFFTTK APGEGTGLGL SQVFGFAKQS GGDVEVASIQ GQGTTFTLYL PQVEQPAEQA
NAAAELSQSQ VSGARRRILV VEDNPDLGTF TAQILEDHGY RISWVNSAEE ALMELNGAAG
DFDAVFSDVV MPGMGGLALA RELRRQCPQL PVILTSGYSD AIAEGGHEGF TFLAKPYSAE
QVCLLLGKVL AP
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