Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2250 |
Symbol | |
ID | 6111203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 2502771 |
End bp | 2503385 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641622045 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_001749119 |
Protein GI | 170721431 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.233575 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCAATCA GTGTGCTGAC GGCGTTCTGG GCCGTGTCAT TGCTGTTCGT GATCACACCC GGTGCAGACT GGGCTTACGC CATCTCGGCC GGCATGCGCG GGCGCTGGGT GATGCCTGCG GTGGCAGGCA TGCTGTCCGG GCATTTTCTG GCAACCCTGA TCGTTGCAGC TGGCGTGGGT AGCCTGGTTG CCGGGCATCC GCTGGCCTTA TTGTTGCTGA CCTTGGCTGG CTGCACCTAT CTGCTCTGGC TGGGCGGCAA CCTGTTGCTG AGCCCGGCGG TGCCGCAAGG AGGGCCGGGT GATGCAGGCG ATAGCGGCTC GCGCTGGGCG CTAAAAGGCT TTTGCGTGAG CGGGCTCAAC CCCAAGGTGT TCCTGCTTTT CCTGGCCTTG CTGCCGCAAT TCACCGACCC ACAGTCGAGC TGGCCGGTGC CTGTGCAGAT CCTGCTGCTG GGGTTGGTCC ACCTGTGCAG TTCGCTGGTG ATCTATCTGC TGGTCGGCTA TGGCGCCAAA GCCGTCCTGA GTACCCGGCC GGAGGCGGCG AAGTGGGTCG GGCGGTTATC GGGAACGGCG ATGATCCTGG TGGCGTTGGG GTTGATGATC GGGCAACTCG GCTGA
|
Protein sequence | MAISVLTAFW AVSLLFVITP GADWAYAISA GMRGRWVMPA VAGMLSGHFL ATLIVAAGVG SLVAGHPLAL LLLTLAGCTY LLWLGGNLLL SPAVPQGGPG DAGDSGSRWA LKGFCVSGLN PKVFLLFLAL LPQFTDPQSS WPVPVQILLL GLVHLCSSLV IYLLVGYGAK AVLSTRPEAA KWVGRLSGTA MILVALGLMI GQLG
|
| |