| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2237 |
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| Symbol | |
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| ID | 6111190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2488350 |
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| End bp | 2489684 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641622032 |
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| Product | general substrate transporter |
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| Protein accession | YP_001749106 |
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| Protein GI | 170721418 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0866984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCAGCA CCACCCTGAA TGCTCCCACC CTCGCCGGTG CCACCCAAGG CGCCGAACGC
CAGGCCCTGC GCAAGGCCGC CCGCGCCAGT TTCATGGGCA ACTTCGTCGA ATGGTTCGAT
TACGCGGCCT ACGGCTACCT GGCGACCATC ATCGCCGCCA CCTTCTTTCC GCAAACCGAC
AAGACCAGCG GCTTGCTCGC GACGTTCGCG GTATTCGCCC TGTCCTTCCT CGTACGCCCG
CTGGGCGGGG TGGTGTGGGG CCATTTTGGC GATCGTCATG GCCGGCGCAA TGCTTTGTCA
CTGTCGATCC TGATCATGTC GATTTCGACC TTCTGCATTG GCCTGCTGCC GGGGTATGCG
CAGATCGGCC TGTGGGCGCC GTGCCTGTTG TTGCTGATCC GCCTCGTGCA GGGCTTTTCT
GCTTCGGGCG AGTATGCCGG CGCTGCGGCA TTTCTCGCCG AGTATGCACC GCCTGGCCGA
AGGGGGCTGT ACACCAGCAT CGTGCCGGCC AGCACTGCGG CCGGGCTGTT GTTTGGTGCA
GCATTTGTCG CGGCCTTGCA TGAACTGCTC AGCACTGAAG ACCTGCACAG CTGGGGCTGG
CGCCTGCCAT TTTTGCTGGC GGCGCCGTTT GGCCTGGTGG GACGTTATAT CCGCATGAGC
CTGCAGGACA CACCCAAGTT CCTGGAGATG GAACAGCGGC TGGAAAGCAA GGCCTGCATG
ACGCCGGCGC CGATCCGCGA ACTGCTGAGC CGGCACCGCC GCAGCCTGGC CATCGGTATC
GGGGTTACCT GCCTCAATGC TGTGGCGTTC TACCTGCTGC TCAGTTACAT GCCCACTTAC
CTGTCGAGTG AAATGGGCAT GAGCGAGCGT GACTCGTTCA TCGCCTCGAC GGTTTCCCTG
GCCACCTACA TCGGCCTGAT CTTCCTGATG GGACGCTTGT CTGACCACTT TGGCCGCAAG
ACTATGCTGG TGGTTGCTTC GCTGCTGTTC CTGGGGTTGA CCGTGCCGCT GTTCAAGCTG
CTCGATGGTC AGCCCCTGCT GGTGGTCCTG GCGATCCAGA TCTTCTTCGG GGCGATGCTG
GCGATGAACG ACGGCACCTT GCCTTGCCTG CTCGCGGAAA TCTTCCCCAC TCGCGTCCGT
TTCAGTGGCT TTGCCTTGAG CTTCAACCTG GCCAACGCCT TGTTTGGCGG GACGGCACCG
TTCATCGCCA CCTGGTTGAT TCATGTGACC GGTAGCAAAC TGGCGCCGGC CGGGTACCTG
CTGGCGGCGG CGCTGGTGGC GCTGGTGGCC ATGTTGATGT GCCGGGAAAC GGCCCACGAC
GAACTGAAAG ACTGA
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| Protein sequence | MSSTTLNAPT LAGATQGAER QALRKAARAS FMGNFVEWFD YAAYGYLATI IAATFFPQTD
KTSGLLATFA VFALSFLVRP LGGVVWGHFG DRHGRRNALS LSILIMSIST FCIGLLPGYA
QIGLWAPCLL LLIRLVQGFS ASGEYAGAAA FLAEYAPPGR RGLYTSIVPA STAAGLLFGA
AFVAALHELL STEDLHSWGW RLPFLLAAPF GLVGRYIRMS LQDTPKFLEM EQRLESKACM
TPAPIRELLS RHRRSLAIGI GVTCLNAVAF YLLLSYMPTY LSSEMGMSER DSFIASTVSL
ATYIGLIFLM GRLSDHFGRK TMLVVASLLF LGLTVPLFKL LDGQPLLVVL AIQIFFGAML
AMNDGTLPCL LAEIFPTRVR FSGFALSFNL ANALFGGTAP FIATWLIHVT GSKLAPAGYL
LAAALVALVA MLMCRETAHD ELKD
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