Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2145 |
Symbol | |
ID | 6111098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 2388915 |
End bp | 2390210 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641621940 |
Product | outer membrane porin |
Protein accession | YP_001749014 |
Protein GI | 170721326 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.832891 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.088551 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGTCA ACACGTCACA GCGTCATTCC CCGACCGCGC GCCTGGCTGG CGGCTGCATC GCCGCAGCCC TCTGTGCTGA AGCAACGGCC GAAGTAGAGG CCGGTTTCAT CGAGGGCGCC AGTGCTACGC TGCAAGCGCG CAATTATTTC TTCAGCCGCG ATTATGCCGA TATCAAAGGG GCGAGCACGC AGTCGCGCAC CCAGGAGTGG GCCCAGGGTT TCATCCTCAA TGCCACCTCT GGCTACACCC AAGGCCCCAT CGGCGTTGGT ATCGATGTCA CCGGCCTGCT GGGTTTCAAG CTCGACAGCA GCCCCGCGCA TGCCAGGTCA GGGCTGTTGC CCAGCCTTGA CAGCGGCCAG TCGGCAGACG ACTACAGCCG CCTGGGTGCG GCGGTGAAAT TCAAGGTGTC GCGCACCGAA CTGAAGGTGG GCGAATTGAT GCCCAACCTG CCGGTGCTGC TTTTCAGCGA CCTGCGCCTG CTACCGCCGA CCTACCAGGG CGCCATGCTC GAGTCCCGCG AGTTTGCCGG GTTGACCTTG AGCGCCGGGC AGTTTCGCTC CACCAGCCTG CGCGACTCCT CCAACAGCCA GAAGATGTAT GCCCTGGTCA ATGACCCGAT CAACCCTTCA CGGTTGGCGC GATTCACCAG TGATCGTTTC AATTATGTCG GCGCGGACTA TGCGTTCAAC GACAACCGTA CCCAGGTCGG CGTGTGGCAA GCGCAGCTGG AAGACATCTA CCAGCAGCGT TTTTACAGCC TCAAACACGC TGAACCTTTG GGTGACTGGA CCCTGGGGGT GAATGCCGGC TACTTCGATG CCCAGGAGGA TGGCCGGCAG ATCGCAGGCC GTTACGACAA CCATGCACTG TTCAGCCTGT TCTCGGCCAA AACGGGTGGG CATACCTTCT ATGTGGGGTA CCAGCAGATC GGCGGGGACG ACGGGTTCAT CCAGGTTGGC GCCAACACCA ACCCGATGGG CAATACCCTG CCCACCTATG AGTTCGCAGC GCCCGGTGAG CGCTCGTGGC AGGCTCGTCA CGATTACAAC TTCGTTGCGC TGGGGATACC CGGGCTGACC TCGACGCTGC GCTATGTGAA GGGGCGCGAC GTGGAGACCG GCCTGGGCTT CGAGGGGCGT GACCGGGAGC GCGATCTGGA CCTTGCCTAT GTGGTGCAGA GCGGCCCCCT GGCCGGGCTG GGGGTACGGA TTCGCAACGT GATGGCCCGC TCGAACTATC GCACGGACAT TGACGAGAAC CGGTTGATCC TCAGTTATAC GGTAAAGCTG TTCTGA
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Protein sequence | MPVNTSQRHS PTARLAGGCI AAALCAEATA EVEAGFIEGA SATLQARNYF FSRDYADIKG ASTQSRTQEW AQGFILNATS GYTQGPIGVG IDVTGLLGFK LDSSPAHARS GLLPSLDSGQ SADDYSRLGA AVKFKVSRTE LKVGELMPNL PVLLFSDLRL LPPTYQGAML ESREFAGLTL SAGQFRSTSL RDSSNSQKMY ALVNDPINPS RLARFTSDRF NYVGADYAFN DNRTQVGVWQ AQLEDIYQQR FYSLKHAEPL GDWTLGVNAG YFDAQEDGRQ IAGRYDNHAL FSLFSAKTGG HTFYVGYQQI GGDDGFIQVG ANTNPMGNTL PTYEFAAPGE RSWQARHDYN FVALGIPGLT STLRYVKGRD VETGLGFEGR DRERDLDLAY VVQSGPLAGL GVRIRNVMAR SNYRTDIDEN RLILSYTVKL F
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