| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2120 |
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| Symbol | |
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| ID | 6111073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2354062 |
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| End bp | 2355033 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641621915 |
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| Product | urea amidolyase related protein |
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| Protein accession | YP_001748989 |
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| Protein GI | 170721301 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1984] Allophanate hydrolase subunit 2 |
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| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00861242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.545781 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGG TACTCAAGCC TGGCCTGGCA ACTTCGGTGC AGGACCTGGG CCGTGAAGGC
TATTACCACC TGGGTATCCC GCCCTCCGGT GCGCTTGATC AATATGCGCT GCGCGCCGCC
AATCAGCTGG TCGGCAATCC GGCGGGTACT GCTGGCCTTG AATGCGCGCT GGTGGGGCCG
GAGCTGGAGT TTCTGCAGGA TGCGCTGGTG GCGGTGTGTG GTGCACAGAT GCCGGTGCTG
CTCGATGGCC GCGAACAGCG CCCTGACACT TCGTTTGCAG TCAGGGCAGG CCAGGTGCTG
CGCTTCGCCT TCCCCACAGC CGGGGCACGT GCCTACCTGG CAGTCGCGGG CGGCATCGAT
GTGCCAGAAG TGCTGGGCAG CCGGTCCACT TACGCCTTGG GCGCGCTGGG CGGTTTTCAC
GGTCGCAAGC TGCTGGCAGG CGATGTATTG CCGGTCGGTG TGCCCAGCGC CAAAGCCCGT
GCCGGAGCCA GTTTGCCAAT GGCGCTGCGC CAGGCACTGG GTGGGGAAGT GGTGTTGCGC
GTGGTGCCGG GGCTGTACTT CCACCGCCTG ACTGATGCTG CGGCGAAAAG CTTTTTCACC
GATGCCTGGA CGGTGGGCTC CGAGGCCGAC CGCATCGGCT ACCGTTACAA GGGCGGCAAC
GCACTGGGTT TCCAGCCGCG AGAGCAGCCA TTCGGCGCAG GTTCGGACCC GTCCAATATC
GTCGACAGCT GCTACCCGAT CGGCTCGATA CAAGTGCCAG CCGGGCTGGA ACCGATCATT
CTGCACCGCG ATGCAGTGTC CGGTGGTGGG TACGCCATGA TCGGCACGGT GATCAGTGCC
GACCTGGACC TGATCGGGCA GATGCAGCCG AACCAGCAGG CGCGGTTCTT GCCGGTGAGC
ATGGAGGATG CGCTTGAGGC GCGGCGGTCG TATAAGAAGA GGCTGGGGTA TCTGAGCAAA
TTGTTCGGCT GA
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| Protein sequence | MIKVLKPGLA TSVQDLGREG YYHLGIPPSG ALDQYALRAA NQLVGNPAGT AGLECALVGP
ELEFLQDALV AVCGAQMPVL LDGREQRPDT SFAVRAGQVL RFAFPTAGAR AYLAVAGGID
VPEVLGSRST YALGALGGFH GRKLLAGDVL PVGVPSAKAR AGASLPMALR QALGGEVVLR
VVPGLYFHRL TDAAAKSFFT DAWTVGSEAD RIGYRYKGGN ALGFQPREQP FGAGSDPSNI
VDSCYPIGSI QVPAGLEPII LHRDAVSGGG YAMIGTVISA DLDLIGQMQP NQQARFLPVS
MEDALEARRS YKKRLGYLSK LFG
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