Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2119 |
Symbol | |
ID | 6111072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 2353178 |
End bp | 2354065 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641621914 |
Product | allophanate hydrolase subunit 1 |
Protein accession | YP_001748988 |
Protein GI | 170721300 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2049] Allophanate hydrolase subunit 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00766127 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.384729 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAGC CGCTTGCCAG TACCCCGATC CGCTACAGCT TTGGTGCCGA CGAGCACCTG TTTGCCGAGG TCAGCGACAG TATGTCGCTC GAGGCGTTCT TCAAGGGCAT GGCCGTCACC CGGGCGGTGG AGCGCCTGGC GCTGGAGGGC GTGCTGGACA TTTGCCTGGC CAACGCCTCG TTCCAGATCC GCTTCGACCC CGACCGCATC GCCCCCGACG TGCTGCTTGC AGCGGTGCGC GGTGCAGAGG CCGAGGCGGT CGCCGAACGC GCGTTGCACA CCCGGATCAT CGAGATCCCG GTGCTGTACA ACGACCCCTG GACCCATGAA ACCCTCATGC GCTTTCGCGA CCGCCACCAG GACCCGAACA GTACCGACCT CGAATACGCG GCGCGCATCA ATGGCCTGGC CGATGTCGAT GCCTTCATCG CCGCGCACAG TGGCGCGCCT TGGTTCGTGT CGATGGTCGG CTTTGTCGCC GGCCTGCCGT TCATGTTCCA GATGGTCGAG CGCGAGCGTC AGTTGCAGGT GCCCAAGTAC CTGCGCCCAC GCACCGACAC GCCGAAGCTG ACCCTGGGCC ACGGCGGTTG TTTCGGCTGC ATCTATTCGG TGCGCGGGGC AGGGGGCTAC CAGATGTTCG GCGTTACCCC GGCGCCGATC TACGACCCGC AGCAAGGCCT GAACTACCTG AAGGAGCACA TGGTGTTCTT CCGCCCAGGG GACATCGTGC AGTTCAAACC CATCGACCGT CAGGCCTACG ACCAAGCGGT GGCGGATGTC GAGGACGGCC GTTTCGACCT GCGCATTCGC CCGGTAGAGT TTTCCCTCGA TGCTTTCCTG GCCGACCCGG TCGGCTATCC CAAGTCCTTG CAGGAGGTGT TGGCATGA
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Protein sequence | MAEPLASTPI RYSFGADEHL FAEVSDSMSL EAFFKGMAVT RAVERLALEG VLDICLANAS FQIRFDPDRI APDVLLAAVR GAEAEAVAER ALHTRIIEIP VLYNDPWTHE TLMRFRDRHQ DPNSTDLEYA ARINGLADVD AFIAAHSGAP WFVSMVGFVA GLPFMFQMVE RERQLQVPKY LRPRTDTPKL TLGHGGCFGC IYSVRGAGGY QMFGVTPAPI YDPQQGLNYL KEHMVFFRPG DIVQFKPIDR QAYDQAVADV EDGRFDLRIR PVEFSLDAFL ADPVGYPKSL QEVLA
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