Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2097 |
Symbol | pbpG |
ID | 6111050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 2330430 |
End bp | 2331320 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641621892 |
Product | D-alanyl-D-alanine endopeptidase |
Protein accession | YP_001748966 |
Protein GI | 170721278 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.582516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTCACAG GTACCGCGAC CCTACCGTCG ACCGCTGCTG CACAACCCCC AGCCCAGATT CAACGCGACC CTTCAAAGCT GCATCTGGCT TCCGGCAGCG CCCTGCTGAT CGACCTCAAT ACCAACAAGG AGCTGTATTC GAGCCACGCC GACCGCGTGG TGCCGATTGC CTCGGTGACC AAACTGATGA CCGCGATGGT GGTGCTGGAC GCCAAGCTGC CCATGGATGA GATGCTCACC ATGACCATCG CCAACAACCC GGACATGAAA GGGGTGTACT CGCGCGTGCG CCTGGGCAGC CAACTCAACC GCCGCGAAAC CCTGCTCATT ACCCTGATGT CGTCAGAAAA CCGCGCCGCC ACCTCCCTGG CCAACCACTA TCCAGGGGGC TACCCGGCTT TCATCAAGGC AATGAACGCC AAAGCCCGCA GCCTGGGCAT GGCGCACACC CGCTATGTCG AGCCGACCGG CCTGTCGACG CAGAACGTCT CCAGCGCACG CGACCTGGCC AAGCTGCTGA TGGCGTCGCG CAAATACCCG ATGCTCAGCG AGCTGTCGAC CACCCGCGAA AAAACCGTGG CCTTCCGCAA ACCCAACTAC ACACTGGGCT TTCGCAATAC CGACCACCTG GTCAACAAGA GCAACTGGGA CATCAAGCTG ACCAAGACCG GCTTCACCAA TGAGGCCGGG CATTGCCTGG TGCTGCTGAC GCGCATGGAC AACCGCCCGG TGGCCATGGT GATCCTCGAT GCGTTCGGCA AGTACACCCA CTTTGCCGAT GCAAGCCGCA TGCGCCAGTG GCTGGAGACC GGCACAGCCA AGCCGGCACC GGCAGTGGCG ATGCAGTACA AGTCGGACCG GCAGAACAAG AGCCGCCTGG CCGCAGAGTA A
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Protein sequence | MLTGTATLPS TAAAQPPAQI QRDPSKLHLA SGSALLIDLN TNKELYSSHA DRVVPIASVT KLMTAMVVLD AKLPMDEMLT MTIANNPDMK GVYSRVRLGS QLNRRETLLI TLMSSENRAA TSLANHYPGG YPAFIKAMNA KARSLGMAHT RYVEPTGLST QNVSSARDLA KLLMASRKYP MLSELSTTRE KTVAFRKPNY TLGFRNTDHL VNKSNWDIKL TKTGFTNEAG HCLVLLTRMD NRPVAMVILD AFGKYTHFAD ASRMRQWLET GTAKPAPAVA MQYKSDRQNK SRLAAE
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