| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2078 |
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| Symbol | |
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| ID | 6111031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2314043 |
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| End bp | 2315236 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641621873 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001748947 |
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| Protein GI | 170721259 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAATA ACGCAGACAC CTCGACTCCC TCCGCCGCAC CCGAACCGTC GCGCAAGCGC
AAAGTCTGGC TGCTTGGCCT GTTGCTGGTG GTGCTGCTTG CCGGCGCTGG CGCCTGGGCC
TGGTACAGCC TGATCGGGCG CTGGCATGAA AGCACCGACG ACGCCTACGT CAATGGCAAT
GTGGTGGAGA TCACCCCGCT GGTCACCGGC ACCGTCATCA GCATCGGCGC CGATGATGGC
GACCTGGTAC ACGCCGGCCA GGTGCTGCTG CAGTTCGACC CGGCCGACAG CGAGGTGGCC
CTGCAGGCCG CGCAAGCCAA GCTGGCCCGG ACGGTGCGAC AGGTCCGTGG CCTGTACAGC
AACGTTGATT CACTCAAGGC CCAGTTGCAG ACACGCCAGG CCGAGCTGCA GAAGGCCCGG
CAGAACTACA ACCGGCGCAA GGTGCTGGCC GACAGCGGCG CGATTGCCGC GGAAGAAATC
TCCCATGCTC GCGATGACCT GACCGTGGCC CAGGCCGCCG TCAACAGCGC GCGCCAGCAG
CTCAATACCA GCACGGCGCT AGTGGACGAC ACGGTAGTGT CTTCGCACCC TGAGGTCATG
GCCGCCGCCG CCGACCTGCG CCAGGCTTAC CTGGACCACG CACGCACCAC GCTGGTGGCG
CCAGTCACCG GTTACGTTGC CAAACGTACC GTGCAGCTCG GCCAGCGTTT GCAGCCGGGC
ACCGCGACCA TGGCAGTCAT CCCGCTGGAC GAGGTGTGGA TCGACGCCAA CTTCAAGGAA
ACCCAGCTGC GCGACATGCG TATCGGCCAA CCAGTGGAAA TCAGCGCCGA CCTGTACGGT
AGCGACGTCA AGTACAGCGG CACGGTCGAT AGCCTGGGCG CCGGCACCGG CAGCGCGTTC
GCCTTGCTGC CGGCACAGAA CGCCACCGGC AACTGGATCA AGATCGTCCA GCGCGTACCG
GTGCGCATCC ACCTCAGCCC GGACCAGCTC AAGGACCACC CGCTGCGCAT CGGCCTGTCC
ACCGTGGTCG AGGTCGACCT GCACGACCAG AGCGGCCCGG CCCTGGCCCA ACAGCCGCCG
CAGCAGGCCA GCTACACCAC CCAGGTGTAC GACCGTCAGT TGGTCGAAGC TGACCATCTG
ATCGCTCGGC TGATCCACGA CAACAGCGCC CCCGGCAAGA CGGCGCAACG ATGA
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| Protein sequence | MANNADTSTP SAAPEPSRKR KVWLLGLLLV VLLAGAGAWA WYSLIGRWHE STDDAYVNGN
VVEITPLVTG TVISIGADDG DLVHAGQVLL QFDPADSEVA LQAAQAKLAR TVRQVRGLYS
NVDSLKAQLQ TRQAELQKAR QNYNRRKVLA DSGAIAAEEI SHARDDLTVA QAAVNSARQQ
LNTSTALVDD TVVSSHPEVM AAAADLRQAY LDHARTTLVA PVTGYVAKRT VQLGQRLQPG
TATMAVIPLD EVWIDANFKE TQLRDMRIGQ PVEISADLYG SDVKYSGTVD SLGAGTGSAF
ALLPAQNATG NWIKIVQRVP VRIHLSPDQL KDHPLRIGLS TVVEVDLHDQ SGPALAQQPP
QQASYTTQVY DRQLVEADHL IARLIHDNSA PGKTAQR
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