| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2070 |
|---|
| Symbol | |
|---|
| ID | 6111023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 2304495 |
|---|
| End bp | 2306177 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641621865 |
|---|
| Product | amidohydrolase 3 |
|---|
| Protein accession | YP_001748939 |
|---|
| Protein GI | 170721251 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCG CTGCAGAGCT CATCATCCAT AACGCCCGCA TCTACACCGT CGACCCGCAC
CAGCCCTGGG CCGATGCCGT GGCCATCCAG GGCGAACGCA TCCTGCGCGT GGGCGACAAG
GCCAGTGTCA TGGCCCATGC CGGCCCATCC ACCCGTTTGT TGGATGCCGA CGGCAAGCTG
GTGCTGCCTG GCTTCGTCGA ATCGCACTGG CACTTTTCCA GCACCGCGTT CGCCTTCCAG
GCCCTGGTCA ACCATGAAGA CCCACACCAG GTGCTGGCCC TGCTCAAGCA GTACGTCCAG
GCCAACCCCG CCGAGAAGGC CATCACCGGC ATGGGCTGGA TACAGCCGCT GATGCCGGCC
GACATGCTGC GCCGTGAAGT GCTGGACGCC ATCTGCCCGG ACAAGCCGGT GTGCCTGTTG
TCCACCGACT ACCACACCAT GTGGGTCAAC AGCTTTGCCC TGCAAGCGGC GGGCATCGAC
CGCGACACCC CCGCGGTGGA AGAAGGCGCC AGCTGGTTCG AAAAAGACCC GGTCACCGGC
GAACCCACCG GCATCATCAT TGACTGCGCG GCTTACTCGC TGCTGATGCA ACGCCTGAGC
GAGGCCGGCT ACCTGCCGAC GGGGATCGAC CTGTACCTGC GCTCGATCCC GTTCTGGCAA
GAGAAGCTGG TGGCTGCCGG CATCACGACG GTGTTCGACG CAGGCTTCCT CGACCCCAGC
GGCGACCAGG CGCTGCTGTA TGAAACCCTG CAGCAACTGG AACGCGAAGC ACGCCTGAAA
CTGCGTGTGG TGGGCAGCTA CATCAACATG GGCACCGAGC CCGACCCGGT CATCCAGCTG
CAGGCCCTGC GCCAGCGCTA CAACTCGCCG CTGGTGAAGG CGCAGACCCT CAAGCTGATG
CTCGACGGCA CCGAGCTGAA CCACACCGCA TTCCTGCTCG AGCCCTACTG CGACAAACCC
CACAGCTGTG GCTCGACGAC CATGCCGGAG GCGGTGTTCG AAGAGCATGT ACGCAACGCC
GACGCCAACG GTATCGACGT GATGGTGCAT GCGGTGGGTG ATGCAGCGGT GCGCATGGCC
CTGGACGTGT TCGAGCGCAC CTTCGCCAGC AACCCGCCGC GCGACCGACG GCATGTGATC
ACACACGCCT TCCTCACCCA CCCCGACGAC ATCCCGCGTT TTCGCCGCAT TGGCGTCATG
GCCAACACCC AGTTGCAATG GGGTGTGGTC GATGCCTATG CCGAGGCGAT CCAGCAGTCG
TACGGGTTCA AGCGTTGGGC CTCGATGTAC AAATTCCGTA CCTTCATCGA CCAGGGTGTG
ACCGTGTCCA TCGGCATGGA CGGGCTGGTG TGCCAGTGCC GCTGCCAACA CAAACCGGTG
GAGCACATCG AGTCGGGCCA CACCCGCCAG CTCAGCGGCG AGCCCGATGC ACCGGTGATG
CCTGATGCCA ACGAGCGCCT GAGCATTCCC CAACTGATCG CCGCTTACAC CCTCAACGGC
GCCTACCAGC TGGGCCTGGA AAAAGAGATT GGTTCGATTA CCGAGGGCAA ACGGGCAGAC
ATCATCATCA TGGAACAGGA CCTGTTCGAG CTGGACCGCT ACCAGATCGG TAAAACGGAC
GTGGCCATGA CCTTGATGAA CGGCCGTATT ACCCACGATG CAGGCACCCT CCCCCACGCC
TGA
|
|---|
| Protein sequence | MTAAAELIIH NARIYTVDPH QPWADAVAIQ GERILRVGDK ASVMAHAGPS TRLLDADGKL
VLPGFVESHW HFSSTAFAFQ ALVNHEDPHQ VLALLKQYVQ ANPAEKAITG MGWIQPLMPA
DMLRREVLDA ICPDKPVCLL STDYHTMWVN SFALQAAGID RDTPAVEEGA SWFEKDPVTG
EPTGIIIDCA AYSLLMQRLS EAGYLPTGID LYLRSIPFWQ EKLVAAGITT VFDAGFLDPS
GDQALLYETL QQLEREARLK LRVVGSYINM GTEPDPVIQL QALRQRYNSP LVKAQTLKLM
LDGTELNHTA FLLEPYCDKP HSCGSTTMPE AVFEEHVRNA DANGIDVMVH AVGDAAVRMA
LDVFERTFAS NPPRDRRHVI THAFLTHPDD IPRFRRIGVM ANTQLQWGVV DAYAEAIQQS
YGFKRWASMY KFRTFIDQGV TVSIGMDGLV CQCRCQHKPV EHIESGHTRQ LSGEPDAPVM
PDANERLSIP QLIAAYTLNG AYQLGLEKEI GSITEGKRAD IIIMEQDLFE LDRYQIGKTD
VAMTLMNGRI THDAGTLPHA
|
|---|
| |