Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2049 |
Symbol | |
ID | 6111002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 2280621 |
End bp | 2282504 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641621844 |
Product | feruloyl-CoA synthase |
Protein accession | YP_001748918 |
Protein GI | 170721230 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0087834 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATAACC AAGCCCGCAC AGGGTCAACC GACCCTGGCC AAAGCCCGCG CTATCGGCAG GTGTCCATCG GGCATCCCAA GGTGCAGTTC AGCGAGGCCG ACGGCATCCT ACGTATGCAA GCCGTCGAGC CCCTGGCGCC GCTGCCGTCG CGCCTGCTTG ACCGGCTGCT GCACTGGGCC GCACAGCGCC CGGACACCAC CTTCATTGCC GCGCGTCAGC CCGATGGTGC CTGGCGCACA ATCACCTACG CACAAATGCT CGCGCAGGTA CGCACCATCG CCGCCAACCT GCTGGGCTTT GGCCTGAGCG CCGAGCGGCC GCTGGCGCTT TTTTCCGGCA ACGATATCGA GCACCTGCAG GTCGCCTTGG GCGCCATGTA CGCCGGCATC CCGTATTGCC CGGTGTCGCC GGCCTACGCA CTGTTGTCCC AGGACTTCGC CAAGCTGCGG CATGTGTGCG AGGTACTGAC GCCGGGGCTG GTGTTCGCCA CCGACACCCA GCCGTTCCAG CGTGCCTTCG ACGCCGTGCT GGACCCATCG GTGGCGGTGG TGAGCGTGCG CGGCCAGGCC CCGGGCCGCC GGCACCTGAG CTTCGACAGC CTGCTGCAGC CGGGCGACCT TGCGCGAGCC GATGCGGCGT TTGCCGCCAC CGGGCCCGAC ACTATCGCCA AGTTCCTCTT CACCTCAGGC TCCACCAAGC TGCCCAAGGC GGTCGTCACC ACCCAACGCA TGCTGTGCGC CAACCAGCAG ATGCTGTTGC AGACCTTTCC GGTGTTCGCT GAAGAGCCGC CGGTGCTGGT GGACTGGCTG CCGTGGAACC ACACCTTTGG CGGCAGCCAC AACCTGGGCA TCGTGCTGTA CAACGGCGGC AGCTTTTACC TGGACGCCGG CAAGCCGACC CCGCAGGGCT TCGGCGAAAC CTTGCGCAAC CTGCGCGAGA TTTCCCCAAC CGCCTACCTG ACCGTGCCCA AGGGCTGGGA AGAACTGGTC AAGGCGCTGG AGCAGGACGC ACAGTTGCGC GAGGTGTTCT TTGCCCGCAT GAAGCTGTTC TTCTTCGCCG CAGCGGGGCT TTCGCAAAGC GTGTGGGACC GCCTGGACCG CATCGCCGAA CAGCACTGTG GCGAGCGCAT CCGCATGATG GCCGGCCTTG GCATGACCGA AGCGGCGCCG TCCTGCACGT TCACCACCGG GCCTTTGTCG CTGGCAGGCT ATGTGGGCTT GCCTGCCCCG GGGTGCGAAG TGAAGCTGGT GCCGCTGGAC GGCAAGCTGG AGGCACGTTT TCGCGGCCCG CACATCATGC CCGGCTACTG GCGTTCGCCG CAGCAAACGG CCGAGGCGTT CGATGACGAG GGCTTTTACT GCTCGGGCGA TGCCTTGAAG CTCGCCGATG CGCAGCAGCC CGAACAGGGC CTGATGTTCG ATGGGCGTAT TGCCGAAGAC TTCAAGTTGT CGTCCGGGGT GTTCGTCAGT GTCGGGCCGC TGCGTAACCG TGCGGTGCTC GAAGGTTCAC CCTATGTGCA GGACATCGTG GTGGCTGCGC CGGACCGCGA GTGCCTGGGC ATCCTGGTGT TCCCGCGGCT GCCCGAATGC CGTCAACTGG CCGGGCTACC GGCTGCGGCC AGCGATGCCG AAGTGCTCGG CAGCGACGCG GTGCGCAGCT GGTTCGCCGC TTGGCTGGAG CGGCTGAACC GTGACGCCCA GGGCAACGCC AGCCGGATCG AATGGTTGTC ACTGCTGGTA GAGCCGCCGT CGATCGACGC CGGGGAAATC ACCGACAAAG GTTCGATCAA CCAGCGTGCG GTGTTGCAGC GCCGGGCTGA CACGGTAGAG GCGCTGTACC GTGGCGAAGA CCCGACCGTG CTGCCCGCGC AGGTACGCCC GTGA
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Protein sequence | MNNQARTGST DPGQSPRYRQ VSIGHPKVQF SEADGILRMQ AVEPLAPLPS RLLDRLLHWA AQRPDTTFIA ARQPDGAWRT ITYAQMLAQV RTIAANLLGF GLSAERPLAL FSGNDIEHLQ VALGAMYAGI PYCPVSPAYA LLSQDFAKLR HVCEVLTPGL VFATDTQPFQ RAFDAVLDPS VAVVSVRGQA PGRRHLSFDS LLQPGDLARA DAAFAATGPD TIAKFLFTSG STKLPKAVVT TQRMLCANQQ MLLQTFPVFA EEPPVLVDWL PWNHTFGGSH NLGIVLYNGG SFYLDAGKPT PQGFGETLRN LREISPTAYL TVPKGWEELV KALEQDAQLR EVFFARMKLF FFAAAGLSQS VWDRLDRIAE QHCGERIRMM AGLGMTEAAP SCTFTTGPLS LAGYVGLPAP GCEVKLVPLD GKLEARFRGP HIMPGYWRSP QQTAEAFDDE GFYCSGDALK LADAQQPEQG LMFDGRIAED FKLSSGVFVS VGPLRNRAVL EGSPYVQDIV VAAPDRECLG ILVFPRLPEC RQLAGLPAAA SDAEVLGSDA VRSWFAAWLE RLNRDAQGNA SRIEWLSLLV EPPSIDAGEI TDKGSINQRA VLQRRADTVE ALYRGEDPTV LPAQVRP
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