Gene PputW619_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1962 
Symbol 
ID6110915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2190926 
End bp2191933 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content66% 
IMG OID641621759 
Productinosine/uridine-preferring nucleoside hydrolase 
Protein accessionYP_001748834 
Protein GI170721146 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1957] Inosine-uridine nucleoside N-ribohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00495918 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0351342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAAC CCCTGCTACA AGGACTCGCC CTCATGGCCG CAGCCGCCAC CACCACGCTC 
CAGGCCGCAC CCCGCGACCT GATCATCGAC ACCGACCCCG GCGCCGACGA TGTGGTCGCG
CTGTTCCTGG CCATGGCCTC GCCGGGCGAG CTCAACATCC GCGCCATCAC CACCGTCGCT
GGCAACGTGC GCCTCGACAA AACCTCGCGC AACGCCCGTC TGGCCCGCGA GTGGGCCGGC
CGCGAAGACA TCCCGGTATA CGCCGGAGCA GGGCGCCCGT TGGTGCGCGC GCCCATCTAC
GCTGCCGAAG TGCATGGCGA AGAAGGCCTG ACCGGTGTCC CGGTGCATGA ACCGAAAAAA
CCCCTGGCCC CGGGCAATGC CGTGCAGTAT CTGGTCGATA CCCTCGGCGC TGCCGAACCC
CGCAGCATCA CCGTGGCCAT GCTCGGCCCA CAGACCAACC TGGCACTGGC ACTGATCCAG
CGCCCGGACA TCGCCAAAGG CATCAAAGAG GTGGTGGTGA TGGGCGGCGC CCACTTCAAC
GGCGGCAACA TCACCCCGGC GGCAGAATTC AACCTCTACG CCGACCCGCA CGCCGCCGAG
GTGGTGTTGG CCAGTGGCGT GCCACTGACC TACCTGCCAC TGGACGTCAC CCACAAACTG
CTGACCAGTG ACGCCCGCCT CAAGCAGCTG GCAGCCGTGA ACAACCAGGC CAGCAAGCGC
GTGGTAGACA TCCTGAATGC GTACATCAAA CACGACATGG ACTTGTACGG CATGCCCGGC
GGCCCGGTGC ATGACGCCAG CGTCATTGCT TATCTGCTCA AGCCCGAGCT GTTCAGCGGG
CGGCGCATCC ACATCAGCGT CGACAGCCGC GAGGGCCCGA CCTTCGGCCA GACTGTCGCT
GACTGGTACG GCGTGCTCAA GCAGCCGGCC AACGTGATGT GGGTGGGCGA GGGCGATGCC
CAGGGCTTTT TCGACCTGCT CAGCGCGCGC CTGGCTCGAT TGCAATAG
 
Protein sequence
MLKPLLQGLA LMAAAATTTL QAAPRDLIID TDPGADDVVA LFLAMASPGE LNIRAITTVA 
GNVRLDKTSR NARLAREWAG REDIPVYAGA GRPLVRAPIY AAEVHGEEGL TGVPVHEPKK
PLAPGNAVQY LVDTLGAAEP RSITVAMLGP QTNLALALIQ RPDIAKGIKE VVVMGGAHFN
GGNITPAAEF NLYADPHAAE VVLASGVPLT YLPLDVTHKL LTSDARLKQL AAVNNQASKR
VVDILNAYIK HDMDLYGMPG GPVHDASVIA YLLKPELFSG RRIHISVDSR EGPTFGQTVA
DWYGVLKQPA NVMWVGEGDA QGFFDLLSAR LARLQ