| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1948 |
|---|
| Symbol | |
|---|
| ID | 6110899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 2178102 |
|---|
| End bp | 2178905 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641621743 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001748820 |
|---|
| Protein GI | 170721132 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.168356 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.000258843 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGGTT CGTTTGGTTC CAAGCCCGCA CCGGGCTATA CCCACGTCGC CTGGCGTCCT
ATGATCGTGG CTCAAGGCCG GGCGTTGCCA GCCTGGCGCC AGAACAAGCG AGTGTCCATG
GTGCAAATTT CCTCCAAGTC CCGGGTTTTC GAGCCGCGCC GCCTGATGGT GGCCTGCCTG
CTGGCCGCGA GCCTCTCAGG CTGTGCCGGC ACGCCGCCGG CCGCCGTCAA GGGCGTTGCG
CAGCGGGTCG AGATCAGCAG CGTGCCGTTC TACCGAGGCA ACGCCAACCA CAGTGGGGCC
ATGGCGCTGG CGGCGTTGCT CTCGCAGCAG GGCGCGCCGA TCACCCCAGG GCTGCTGGAC
AAGCCGCTGA ACCTGCCGCA GGGCGCCGAG TCGCTGGGCA CCGGCATCCC GCGCGTGGCT
CGCGATTACG GCAGGGTCGT ATACCCGCTC GACAAACAGC TGGACGCCCT GTTGACCCAG
GTCGCTGCAG GCAACCCGGT GCTGGTGCGT TTTCAGGAAG GTTCGGCGTG GTGGAGCGAG
CCGCGCTACG CGGTGCTGAT CGGTTTTGAC CGTTACAAGC AGAGGGTGCT GCTGCGTTCA
GGGATGCACC GGCGGCAGAT GATGGCCTTC GATGATTTCA CGTCGGCGTG GGCGCAAGAG
GGGAGCTGGG CAATACTGGT ACAGCCGCCG CGGCAACTGC CGGCCCAGGT GGACCGGCAG
CGCTGGCTGC AGGCTGCCGA CGAGTTAGCC CGTGCGGGCC AGGAATTGGC GGCGAAGCAG
GCCGTGGACA GCCTGGAAAG GTAA
|
|---|
| Protein sequence | MLGSFGSKPA PGYTHVAWRP MIVAQGRALP AWRQNKRVSM VQISSKSRVF EPRRLMVACL
LAASLSGCAG TPPAAVKGVA QRVEISSVPF YRGNANHSGA MALAALLSQQ GAPITPGLLD
KPLNLPQGAE SLGTGIPRVA RDYGRVVYPL DKQLDALLTQ VAAGNPVLVR FQEGSAWWSE
PRYAVLIGFD RYKQRVLLRS GMHRRQMMAF DDFTSAWAQE GSWAILVQPP RQLPAQVDRQ
RWLQAADELA RAGQELAAKQ AVDSLER
|
|---|
| |