| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1933 |
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| Symbol | |
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| ID | 6110884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2163487 |
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| End bp | 2164296 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641621728 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001748805 |
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| Protein GI | 170721117 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0161656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCTGT CTCCCAATGC CATGGGGCGC CCGCTGCGTA CGGGCCTGTA CCTGACCACC
GGAGTGATTG CGGCCTTCCT GCTGCTGCCG GTAGTGTTCA TCATCCTGCT GTCGTTTGGC
TCATCACAGT GGCTGGTATT CCCGCCACCA GGCTGGACCT TCAAGTGGTA TGCGCAGTTC
TTCGCCAACC CGGAGTGGAT GGACGCCGCC CTGGCCAGCT TCAAAGTCGC CGTGCTGACC
ACCATCGCCG CCGTGCTGCT GGGCCTGCCT ACCGCATTCG CCCTGGTGCG CGGCCGCTTC
CCCGGCCGCG AGATGCTCTA CGGGCTTTTC ACCATGCCCA TGATCGTGCC GTTGGTGATC
ATTGCAGTGG CGGTGTATGC ACTGTTTCTG AAGCTCGGCT ACACGGGCAC GCTGTTCGCC
TTCGTGGTCA GCCATGTGAT CGTCGCCCTG CCCTTCACCA TCATTTCGAT CATCAACTCG
CTCAAGCTGT TCGACCAGTC GATCGAGGAT GCCGCGGTGA TCTGCGGTGC CTCGCGCCTG
CAGGCGATCT TCAAGGTGAC CTTCCCGGCC ATTCGCCCGG GGATGATCGC CGGCGGTCTG
TTCGCCTTCC TGGTCTCGTG GGACGAGGTA GTACTGAGCG TGATGATGGC CAGCCCCGAC
CTGCAAACCC TGCCCGTGAA GATGTGGACC ACCCTGCGCC AGGACCTGAG CCCGGTGATC
GCCGTCGCCT CGACGCTGCT GATCGGCCTG TCGCTGTTGG TCATGGTCAT TGCCGCCGCC
TTGCGCCGGC GCACCGAAAC GAACGCCTGA
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| Protein sequence | MLLSPNAMGR PLRTGLYLTT GVIAAFLLLP VVFIILLSFG SSQWLVFPPP GWTFKWYAQF
FANPEWMDAA LASFKVAVLT TIAAVLLGLP TAFALVRGRF PGREMLYGLF TMPMIVPLVI
IAVAVYALFL KLGYTGTLFA FVVSHVIVAL PFTIISIINS LKLFDQSIED AAVICGASRL
QAIFKVTFPA IRPGMIAGGL FAFLVSWDEV VLSVMMASPD LQTLPVKMWT TLRQDLSPVI
AVASTLLIGL SLLVMVIAAA LRRRTETNA
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