| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1912 |
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| Symbol | |
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| ID | 6110863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2142592 |
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| End bp | 2143440 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641621707 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001748784 |
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| Protein GI | 170721096 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.820542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.253219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAGC CGGCCATCCT TGCCGGCCTG ATCGGCCGTG GTATTCAGCT GTCGCGCACC
CCTGCCCTGC ATGAACATGA AGGCGATGCG CAGGACTTAC GCTACCTCTA TCGCTTGATT
GACGCCGACC AACTGCAGCT GGACGACAGC GCCTTGGCGC AATTGCTCGA AGCCGCCCAG
CACACAGGCT TCACCGGGCT CAATATCACC TACCCGTTCA AGCAGGCGAT CCTGCCACTG
CTCGACGAAC TGTCCGATGA GGCCAGGGGT ATCGGTGCGG TCAACACTGT GGTCCTCAAG
GACGGCAGGC GTGTGGGCCA TAACACTGAC TGCCTGGGCT TCGCCGAGGG CTTGCGTCGC
GGCCTGCCCG ACGTCGCGCG CCGGCAAGTG GTGCAGATGG GTGCCGGCGG TGCTGGCTCG
GCAGTGGCCC ATGCGTTGCT GGGCGAAGGG GTCGAGCGGC TGGTGCTGTT CGAAGTGGAC
GCAGCGCGCG CACAAGCACT GGTCGACAAC CTCAACGGCC ACTTCGGCGC AGATCGAGCC
ATTGTGGGCA CAGACTTGGC GGCTGAGATT GCCGAGGCGG ACGGGCTGGT CAACACCACG
CCGGTCGGCA TGGCCAAACT TCCGGGCACG CCGCTGCCGG TCGAGCTGCT GCATGCCCGG
CTGTGGGTGG CGGAGATCAT CTATTTCCCG CTGGAAACCG AGCTGCTGCG CGCGGCACGG
GCACTGGGCT GCCGGACACT GGATGGCAGC AACATGGCCG TGTTCCAGGC GGTGAAAGCG
TTCGAACTGT TCAGTGGCCG CCAGGCCAAT GCCGAGCGCA TGCAGGCGCA TTTCGCCAGC
CTCATCTGA
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| Protein sequence | MTQPAILAGL IGRGIQLSRT PALHEHEGDA QDLRYLYRLI DADQLQLDDS ALAQLLEAAQ
HTGFTGLNIT YPFKQAILPL LDELSDEARG IGAVNTVVLK DGRRVGHNTD CLGFAEGLRR
GLPDVARRQV VQMGAGGAGS AVAHALLGEG VERLVLFEVD AARAQALVDN LNGHFGADRA
IVGTDLAAEI AEADGLVNTT PVGMAKLPGT PLPVELLHAR LWVAEIIYFP LETELLRAAR
ALGCRTLDGS NMAVFQAVKA FELFSGRQAN AERMQAHFAS LI
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