Gene PputW619_1878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1878 
Symbol 
ID6110829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2100432 
End bp2100896 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content62% 
IMG OID641621673 
Producthypothetical protein 
Protein accessionYP_001748750 
Protein GI170721062 
COG category[S] Function unknown 
COG ID[COG3558] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.55904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCC CTCCATTGCC TCCCTTTACC CGCGAAAGCG CCATCGAAAA AGTCCGCCTG 
GCCGAGGATG GCTGGAACAG CCGTGACGCG GCCAAGGTAT CGCTGGCATA CACACCCGAT
ACCGTATGGC GTAACCGTGT CGAGTTCCCC CGGGGGCGTG CCGAGGTTCA CGCCTTTCTG
ACCCGCAAGT GGAACCATGA ACTGGAGTAC CGACTGATCA AGGAGCTGTG GGCATTCACC
GACAACCGCA TTGCGGTGCG CTATGCCTAC GAGTACCACG ACGACAGCGG CCAGTGGTTC
CGCGCCTATG GCAACGAAAA CTGGGAGTTC GCCGCCGATG GTTTGATGCA CAATCGCCAC
TCGAGCATCA ACGAGCACCC TATTGCCGAA GCGGACCGCA AGTTCCGCTG GCCTTTGGGT
CGTCGCCCGG ACGACCATCC CGGCCTCAGC GAACTGGGGC TCTGA
 
Protein sequence
MSRPPLPPFT RESAIEKVRL AEDGWNSRDA AKVSLAYTPD TVWRNRVEFP RGRAEVHAFL 
TRKWNHELEY RLIKELWAFT DNRIAVRYAY EYHDDSGQWF RAYGNENWEF AADGLMHNRH
SSINEHPIAE ADRKFRWPLG RRPDDHPGLS ELGL