| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1817 |
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| Symbol | |
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| ID | 6110768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2024943 |
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| End bp | 2027153 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641621613 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_001748690 |
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| Protein GI | 170721002 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.297047 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCAA CCACGCGTGA TAACGGTGGC CTTCGGCAGC GGGAGCTCGA TGCCCTTGCC
CGCGCCGAGC ACGCCGATCC TTTTGCAGTA CTTGGCCCCC ATGGCGATGG CGCGGGCGGA
CTGTGGGTCC GGGCCTTCCT GCCAACTGCT CTGAATGCTC GGGTGCTGGC CCGTAATGAC
GGGCGGGTGC TTGCCGAAAT GCAGCAGGGC AGCCTGCCCG GGCTGTTCAC CGCGCACCTC
GATGATGCAC AGCCGTACCT GCTGCAGATC GGCTGGGCCG GTGGCGAGCA GGTGACCGAA
GACCCGTACA GCTTTGGCCC GCAGTTGGGC GACATGGACC TCCACCTGTT TGCCGAGGGT
AACCACCGCG ACCTGTCCGG GCGCTTTGGC GCCCAGCCCA TTCAGGTCGA CGGCGTCGAT
GGGGTGTGCT TTTCGGTATG GGCGCCCAAT GCGCGGCGCG TGTCGGTGGT GGGCGACTTC
AACAATTGGG ACGGCCGTCG TCACCCGATG CGTCTACGGC ACAGTGCCGG GGTGTGGGAG
CTGTTCGTGC CGCGCCTGGG CGTAGGCGAA ACCTACAAAT TCGAGGTGCT GGGCAAGGAG
GGCGTGCTGC CGCTGAAGGC CGACCCGCTT GCCCGTGCCA CTGAGCTGCC GCCCAGCACG
GCATCGAAAG TGGCCGGCGA ACTCAGCCAT TCATGGCAAG ACCAGGAGTG GATGGAACAC
CGCGCCCAGC GCCATGCCTA CAGTGCGCCG CTGTCGATCT ATGAACTGCA CCCAGGCTCC
TGGCAGTGCG AGCTGGATGA CCTGGGTGAA GTGTCGCGCT TCTACAATTG GCGCGAGCTG
GCCGAGCGCC TGGTGCCCTA CGTGCAGAAG CTCAACTTCA CCCACATCGA GTTGCTGCCG
ATCATGGAGC ATCCGTTCGG TGGCTCCTGG GGCTACCAGC CCTTGTCGAT GTTCGCACCG
ACCTCGCGCT ACGGCACGCC AGAAGACTTT GCCGCGTTCA TCGACGCCTG CCACCAGGGC
GGTATCGGTG TGATCCTCGA CTGGGTGCCG GCGCATTTCC CTACGGACGA GCATGGCCTG
GCGCGCTTCG ACGGCACCGC CCTTTATGAG TACGACAACC CCCTGGAGGG TTTCCATCAG
GACTGGAACA CGCTGATCTA CAACCTGGGC CGCAACGAAG TACGCGGTTT CATGCTGGCT
TCAGCCCTGC ACTGGCTCAA ACACTTTCAC ATCGATGGCC TACGGGTCGA TGCGGTGGCC
TCGATGCTGT ACCGCGACTA TTCGCGCAAG GCTGGCGAGT GGGTGCCCAA CCGCCATGGA
GGGCGCGAGA ACCTGGAGGC CATCGATTTC ATCCGCCACC TCAACGGTGT GGCCGCCCAT
GAAGCGCCGG GCGCGCTGAT CATCGCCGAA GAATCCACCG CCTGGCCGGG TGTCAGTCAG
CCCACCCAGC AAGGTGGCTT GGGCTTCGCC TACAAGTGGA ACATGGGCTG GATGCACGAC
ACCCTGCACT ATATCCAGAA TGACCCGGTG CACCGCAGCT ATCACCACAA CGAGATGAGC
TTCGGCCTGA TCTATGCCTA TTCCGAACAT TTCATCCTGC CCATTTCCCA TGATGAAGTG
GTGCACGGCA AGCATTCGCT GATCGACAAG ATGCCCGGTG ATCGTTGGCA GAAGTTCGCC
AACCTGCGGG CTTACCTGAC CTTTATGTGG ACTCACCCGG GCAAGAAGCT GTTGTTCATG
GGCTGTGAGT TCGGCCAATG GCGGGAATGG AACCATGACC ACCAGTTGGA CTGGTATCTG
CTGCAGTACC CCGAGCACCA AGGCGTGCAA CGCCTGGTGG GTGACCTGAA CCGGCTGTAC
CGTGAGCTGC CGGCATTGCA TGAGCAAGAT TGCCAGCCGC AGGGTTTCCA GTGGCTCATC
GGTGATGACG CGCAAAACTG TGTGTATGCC TGGCTGCGCT GGAGCAGCAA TGGTGAGCCA
TTGCTGGTGG TGGCCAACTT CACCCCGGTA CCGCGCGAGG GGTATCGGAT CGGCGTGCCG
TTCGGTGAGC GCTGGCAAGA GCTGCTCAAC AGCGACGCCG AACTGTACGC CGGGTCGAAT
GTGGGCAACC TGGGCGCGGT GGAGAGTGAT GAGGTCGCCA GCCACGGGCA ACCGCTGTCG
CTGGCCCTGA ACCTGCCACC GCTGGGTGTA CTGGTGATGA AACCCGCCTG A
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| Protein sequence | MNATTRDNGG LRQRELDALA RAEHADPFAV LGPHGDGAGG LWVRAFLPTA LNARVLARND
GRVLAEMQQG SLPGLFTAHL DDAQPYLLQI GWAGGEQVTE DPYSFGPQLG DMDLHLFAEG
NHRDLSGRFG AQPIQVDGVD GVCFSVWAPN ARRVSVVGDF NNWDGRRHPM RLRHSAGVWE
LFVPRLGVGE TYKFEVLGKE GVLPLKADPL ARATELPPST ASKVAGELSH SWQDQEWMEH
RAQRHAYSAP LSIYELHPGS WQCELDDLGE VSRFYNWREL AERLVPYVQK LNFTHIELLP
IMEHPFGGSW GYQPLSMFAP TSRYGTPEDF AAFIDACHQG GIGVILDWVP AHFPTDEHGL
ARFDGTALYE YDNPLEGFHQ DWNTLIYNLG RNEVRGFMLA SALHWLKHFH IDGLRVDAVA
SMLYRDYSRK AGEWVPNRHG GRENLEAIDF IRHLNGVAAH EAPGALIIAE ESTAWPGVSQ
PTQQGGLGFA YKWNMGWMHD TLHYIQNDPV HRSYHHNEMS FGLIYAYSEH FILPISHDEV
VHGKHSLIDK MPGDRWQKFA NLRAYLTFMW THPGKKLLFM GCEFGQWREW NHDHQLDWYL
LQYPEHQGVQ RLVGDLNRLY RELPALHEQD CQPQGFQWLI GDDAQNCVYA WLRWSSNGEP
LLVVANFTPV PREGYRIGVP FGERWQELLN SDAELYAGSN VGNLGAVESD EVASHGQPLS
LALNLPPLGV LVMKPA
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