Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1816 |
Symbol | |
ID | 6110767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 2021625 |
End bp | 2024942 |
Gene Length | 3318 bp |
Protein Length | 1105 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641621612 |
Product | trehalose synthase |
Protein accession | YP_001748689 |
Protein GI | 170721001 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases [COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
TIGRFAM ID | [TIGR02456] trehalose synthase [TIGR02457] trehalose synthase-fused probable maltokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.482452 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGC GTTCCCGCCC GGCAGCCTTC CTCGACGACC CGCTGTGGTA CAAGGATGCC GTGATCTACC AGTTGCACAT CAAGTCGTTC TTCGATGCCA ACAACGATGG TATAGGTGAC TTCGCCGGCC TGATCAGCAA GCTCGACTAC ATCGCCGATC TTGGCGTCAA CACCCTCTGG CTGTTGCCGT TCTACCCCTC GCCACGGCGC GATGACGGCT ACGACATCGC CGAATACAAA GCCGTACATC CCGACTACGG CAGCATGGCC GATGCCCGGC GTTTCATCGC CGAGGCGCAC AAGCGCGGGT TGCGGGTGAT TACCGAACTG GTCATCAACC ACACCAGCGA CCAGCACCCC TGGTTCCAGC GTGCTCGCCA TGCCAAGCGT GGCAGCAAGG CCCGCGACTT CTACGTGTGG TCGGATGACG ACCAGAAATA CGACGGTACG CGGATCATCT TCCTCGACAC CGAGAAGTCC AACTGGACAT GGGACCCTGT GGCGGGCCAG TACTTCTGGC ACCGCTTCTA CTCGCACCAG CCGGACCTGA ATTTCGACAA CCCCCAAGTG CTCAAGGCCG TGATCGGGGT GATGCGTTTC TGGCTCGATC TGGGCGTCGA CGGCCTGCGC CTGGACGCTA TCCCCTACCT CATCGAGCGC GATGGCACCA ATAACGAGAA CCTCCCCGAG ACCCACAAGG TGCTCAAGGC GATTCGTGCC GAGATCGATG CCAATTACCC CGACCGCATG CTGCTTGCCG AGGCCAATCA GTGGCCCGAG GACACGCGCC CGTACTTTGG CGAGGGCGAT GGCGACGAGT GTCACATGGC CTTCCACTTC CCGTTGATGC CGCGCATGTA CATGGCCTTG GCCATGGAAG ACCGCTTCCC TATCACCGAC ATCCTGCGCC AGACGCCGGA AATTCCGGCC AATTGCCAGT GGGCCATCTT CCTGCGCAAC CACGATGAGC TGACCCTGGA AATGGTCACC GACCGCGAGC GCGACTACCT GTGGAACTAC TACGCCCAAG ACCGCCGCGC GCGTATCAAC CTGGGTATTC GCCGCCGCCT GGCGCCGTTG CTGCAACGTG ACCGCCGGCG CATCGAGCTG CTCACCAGCT TGCTGCTGTC GATGCCCGGC ACGCCGACCC TGTACTACGG TGACGAACTG GGCATGGGTG ACAACATCTA CCTGGGCGAC CGCGACGGTG TGCGTACCCC CATGCAGTGG TCGCCGGACC GCAACGGCGG TTTCTCCAAA GCCGACCCGC AGCGCCTGGT ACTGCCGCCG ATCATGGACC CGCTGTACGG CTACCAGACT GTCAACGTCG AGGCCCAGGC CCACGACCCG CATTCGCTGC TCAACTGGAA CCGCCGCCTG CTGGCGGTGC GCAACCAGCA GAAAGCCTTT GGCCGCGGCA CCTTGCGTAC GCTCGCCCCG AGTAACCGCC GCATCCTTGC GTACATCCGC GAGTACACCG ATGCTGAGGG CAACAGCGAA GTCATTCTGT GTGTTGCCAA TGTGTCGCGT GCGGCGCAGG CCGCCGAACT TGAATTGTCC CAGTACGCCG ACAAGGTGCC AGTGGAGATG CTCGGCGGCA GCGCCTTCCC GCCTATCGGT CAACTGCCGT TCCTGCTGAC GTTGCCGCCT TATGCCTTCT ACTGGTTCTT GCTGGCAGCG CACGACCGCA TGCCCAGCTG GCATGTTCAA GCTACCGAGG GGTTGCCGGA ATTGACTACG CTAGTGCTGC GCAAACGCAT GGAAGAGCTG CTCGAAACGC CTTCGAGCGA TACATTGCAA GACGCGATCC TGCCGCAATA CCTGCCCAAA CGACGCTGGT TCGCCGGCAA GGAAGGGCCT GTCGACCAGG TGCGCCTGTG TTACGGCGTG CGCTTGGGCA CCGCCACGAC ACCCGTGCTG CTCAGCGAAA TCGAAGTGCT GGGCGATGGC GTGGCCAACC GTTACCAGTT GCCGTTCGGG CTGCTGCCTG AAGACCAGAT CAACAGTGCG TTGCCGCAAC AACTGGCCAT GTCGCGGGTA CGCCGTGGCC GTCAGGTGGG CCTGATCACC GATGCCTTTG TGCTCGAACC CTTCATTCGC GCCGTGCTGC GCGCCTGCCA GGACGGCCTG CGCCTGCCCT GTGGCAATGG CCAGGGCGAG TTACGCTTCC ACTGCACCGA GGCGCTGGCC AGCCTGGGCC TCGATGAAGA CAGCGCTGTG CGTTACCTGA GCGCCGAGCA GTCCAACAGT TCGGTAGTAG TGGGCGATCG CGTAGTGCTC AAGCTGATCC GCCGGGTCAA CCCGGGGGTT CACCCGGAGC TGGAAATGAG CGCCTACCTC ACCGCCGCCG GGTTCGCCAA TATCTCGCCA CTGCTGGCCT GGGTCAGCCG GGTGGATGAA ACGGACGCAC CGCACCTGCT GATGATCGCC CAGGGTTATC TGAGTAACCA GGGCGACGCC TGGGCCTGGA CGCAGAACAC GCTGGAGCGG GCCATCCGCG ACGAGATGGA GCCATCCAGC AACGATGGTG AAGCGCATAC CGACGCATTG GCCGAGCTCA ACGGTTTTGC TGCCTTGCTT GGCCAGCGTC TGGGCGAGAT GCATCTGTTG CTGGCCGCCC CGACCGACGA CCCCGCCTTC CGGCCGCGCA GCAGCGATGG CGAAGACAGC GAGCGCTGGG CCCAACAGAT CAGCAGCGAG CTCTGCCATG CCCTGGACTT GCTGGCGCAG CACCGCGACA GCCTGGACAA CGACAGCCAG GCGTTGGTCG ACGACCTGCA ACAGCAACGT GAAGGCCTTG CCCAGCACAT CGCCAACTTG GCCAGGCAGG CCCAGGGTGG CCTGCTGATG CGGGTTCACG GCGACCTGCA CCTGGGCCAG GTGCTGGTGG TGCAAGGGGA TGCCTACCTC ATCGATTTCG AAGGCGAGCC TTCGCGTGCA CTGCAAGAGC GGCGTGCCAA GCACAGCCCG TACAAGGATG TCAGCGGCGT GTTGCGATCC TTCGACTATG CTGCTGCGAT GATCCTGCGC AGCGCCTCGG CGGTAGACGC TTCCGAGGCG GCACGGCAGG CTCGTCAGCG GGTCGCCCGG CAGTACCTGC ACCAGTCGCG CCACGCCTTC GTCGAAGCCT ATGGCCTGGC CACCGCCGCC ATGCCTCACG CCTGGCAACA GGCCGAGGGC GAGCGCGCCG CACTGGAACT GTTCTGCCTG GAAAAGGCCG CCTACGAGAT TACTTATGAA GCCGAAAACC GGCCAAGTTG GCTGGCCGTG CCTTTGCATG GCTTGCATGG ATTGATCAGT ACCTGGGGAG AGTCATAG
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Protein sequence | MAKRSRPAAF LDDPLWYKDA VIYQLHIKSF FDANNDGIGD FAGLISKLDY IADLGVNTLW LLPFYPSPRR DDGYDIAEYK AVHPDYGSMA DARRFIAEAH KRGLRVITEL VINHTSDQHP WFQRARHAKR GSKARDFYVW SDDDQKYDGT RIIFLDTEKS NWTWDPVAGQ YFWHRFYSHQ PDLNFDNPQV LKAVIGVMRF WLDLGVDGLR LDAIPYLIER DGTNNENLPE THKVLKAIRA EIDANYPDRM LLAEANQWPE DTRPYFGEGD GDECHMAFHF PLMPRMYMAL AMEDRFPITD ILRQTPEIPA NCQWAIFLRN HDELTLEMVT DRERDYLWNY YAQDRRARIN LGIRRRLAPL LQRDRRRIEL LTSLLLSMPG TPTLYYGDEL GMGDNIYLGD RDGVRTPMQW SPDRNGGFSK ADPQRLVLPP IMDPLYGYQT VNVEAQAHDP HSLLNWNRRL LAVRNQQKAF GRGTLRTLAP SNRRILAYIR EYTDAEGNSE VILCVANVSR AAQAAELELS QYADKVPVEM LGGSAFPPIG QLPFLLTLPP YAFYWFLLAA HDRMPSWHVQ ATEGLPELTT LVLRKRMEEL LETPSSDTLQ DAILPQYLPK RRWFAGKEGP VDQVRLCYGV RLGTATTPVL LSEIEVLGDG VANRYQLPFG LLPEDQINSA LPQQLAMSRV RRGRQVGLIT DAFVLEPFIR AVLRACQDGL RLPCGNGQGE LRFHCTEALA SLGLDEDSAV RYLSAEQSNS SVVVGDRVVL KLIRRVNPGV HPELEMSAYL TAAGFANISP LLAWVSRVDE TDAPHLLMIA QGYLSNQGDA WAWTQNTLER AIRDEMEPSS NDGEAHTDAL AELNGFAALL GQRLGEMHLL LAAPTDDPAF RPRSSDGEDS ERWAQQISSE LCHALDLLAQ HRDSLDNDSQ ALVDDLQQQR EGLAQHIANL ARQAQGGLLM RVHGDLHLGQ VLVVQGDAYL IDFEGEPSRA LQERRAKHSP YKDVSGVLRS FDYAAAMILR SASAVDASEA ARQARQRVAR QYLHQSRHAF VEAYGLATAA MPHAWQQAEG ERAALELFCL EKAAYEITYE AENRPSWLAV PLHGLHGLIS TWGES
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