| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1816 |
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| Symbol | |
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| ID | 6110767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2021625 |
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| End bp | 2024942 |
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| Gene Length | 3318 bp |
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| Protein Length | 1105 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641621612 |
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| Product | trehalose synthase |
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| Protein accession | YP_001748689 |
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| Protein GI | 170721001 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases
[COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
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| TIGRFAM ID | [TIGR02456] trehalose synthase
[TIGR02457] trehalose synthase-fused probable maltokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.482452 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGC GTTCCCGCCC GGCAGCCTTC CTCGACGACC CGCTGTGGTA CAAGGATGCC
GTGATCTACC AGTTGCACAT CAAGTCGTTC TTCGATGCCA ACAACGATGG TATAGGTGAC
TTCGCCGGCC TGATCAGCAA GCTCGACTAC ATCGCCGATC TTGGCGTCAA CACCCTCTGG
CTGTTGCCGT TCTACCCCTC GCCACGGCGC GATGACGGCT ACGACATCGC CGAATACAAA
GCCGTACATC CCGACTACGG CAGCATGGCC GATGCCCGGC GTTTCATCGC CGAGGCGCAC
AAGCGCGGGT TGCGGGTGAT TACCGAACTG GTCATCAACC ACACCAGCGA CCAGCACCCC
TGGTTCCAGC GTGCTCGCCA TGCCAAGCGT GGCAGCAAGG CCCGCGACTT CTACGTGTGG
TCGGATGACG ACCAGAAATA CGACGGTACG CGGATCATCT TCCTCGACAC CGAGAAGTCC
AACTGGACAT GGGACCCTGT GGCGGGCCAG TACTTCTGGC ACCGCTTCTA CTCGCACCAG
CCGGACCTGA ATTTCGACAA CCCCCAAGTG CTCAAGGCCG TGATCGGGGT GATGCGTTTC
TGGCTCGATC TGGGCGTCGA CGGCCTGCGC CTGGACGCTA TCCCCTACCT CATCGAGCGC
GATGGCACCA ATAACGAGAA CCTCCCCGAG ACCCACAAGG TGCTCAAGGC GATTCGTGCC
GAGATCGATG CCAATTACCC CGACCGCATG CTGCTTGCCG AGGCCAATCA GTGGCCCGAG
GACACGCGCC CGTACTTTGG CGAGGGCGAT GGCGACGAGT GTCACATGGC CTTCCACTTC
CCGTTGATGC CGCGCATGTA CATGGCCTTG GCCATGGAAG ACCGCTTCCC TATCACCGAC
ATCCTGCGCC AGACGCCGGA AATTCCGGCC AATTGCCAGT GGGCCATCTT CCTGCGCAAC
CACGATGAGC TGACCCTGGA AATGGTCACC GACCGCGAGC GCGACTACCT GTGGAACTAC
TACGCCCAAG ACCGCCGCGC GCGTATCAAC CTGGGTATTC GCCGCCGCCT GGCGCCGTTG
CTGCAACGTG ACCGCCGGCG CATCGAGCTG CTCACCAGCT TGCTGCTGTC GATGCCCGGC
ACGCCGACCC TGTACTACGG TGACGAACTG GGCATGGGTG ACAACATCTA CCTGGGCGAC
CGCGACGGTG TGCGTACCCC CATGCAGTGG TCGCCGGACC GCAACGGCGG TTTCTCCAAA
GCCGACCCGC AGCGCCTGGT ACTGCCGCCG ATCATGGACC CGCTGTACGG CTACCAGACT
GTCAACGTCG AGGCCCAGGC CCACGACCCG CATTCGCTGC TCAACTGGAA CCGCCGCCTG
CTGGCGGTGC GCAACCAGCA GAAAGCCTTT GGCCGCGGCA CCTTGCGTAC GCTCGCCCCG
AGTAACCGCC GCATCCTTGC GTACATCCGC GAGTACACCG ATGCTGAGGG CAACAGCGAA
GTCATTCTGT GTGTTGCCAA TGTGTCGCGT GCGGCGCAGG CCGCCGAACT TGAATTGTCC
CAGTACGCCG ACAAGGTGCC AGTGGAGATG CTCGGCGGCA GCGCCTTCCC GCCTATCGGT
CAACTGCCGT TCCTGCTGAC GTTGCCGCCT TATGCCTTCT ACTGGTTCTT GCTGGCAGCG
CACGACCGCA TGCCCAGCTG GCATGTTCAA GCTACCGAGG GGTTGCCGGA ATTGACTACG
CTAGTGCTGC GCAAACGCAT GGAAGAGCTG CTCGAAACGC CTTCGAGCGA TACATTGCAA
GACGCGATCC TGCCGCAATA CCTGCCCAAA CGACGCTGGT TCGCCGGCAA GGAAGGGCCT
GTCGACCAGG TGCGCCTGTG TTACGGCGTG CGCTTGGGCA CCGCCACGAC ACCCGTGCTG
CTCAGCGAAA TCGAAGTGCT GGGCGATGGC GTGGCCAACC GTTACCAGTT GCCGTTCGGG
CTGCTGCCTG AAGACCAGAT CAACAGTGCG TTGCCGCAAC AACTGGCCAT GTCGCGGGTA
CGCCGTGGCC GTCAGGTGGG CCTGATCACC GATGCCTTTG TGCTCGAACC CTTCATTCGC
GCCGTGCTGC GCGCCTGCCA GGACGGCCTG CGCCTGCCCT GTGGCAATGG CCAGGGCGAG
TTACGCTTCC ACTGCACCGA GGCGCTGGCC AGCCTGGGCC TCGATGAAGA CAGCGCTGTG
CGTTACCTGA GCGCCGAGCA GTCCAACAGT TCGGTAGTAG TGGGCGATCG CGTAGTGCTC
AAGCTGATCC GCCGGGTCAA CCCGGGGGTT CACCCGGAGC TGGAAATGAG CGCCTACCTC
ACCGCCGCCG GGTTCGCCAA TATCTCGCCA CTGCTGGCCT GGGTCAGCCG GGTGGATGAA
ACGGACGCAC CGCACCTGCT GATGATCGCC CAGGGTTATC TGAGTAACCA GGGCGACGCC
TGGGCCTGGA CGCAGAACAC GCTGGAGCGG GCCATCCGCG ACGAGATGGA GCCATCCAGC
AACGATGGTG AAGCGCATAC CGACGCATTG GCCGAGCTCA ACGGTTTTGC TGCCTTGCTT
GGCCAGCGTC TGGGCGAGAT GCATCTGTTG CTGGCCGCCC CGACCGACGA CCCCGCCTTC
CGGCCGCGCA GCAGCGATGG CGAAGACAGC GAGCGCTGGG CCCAACAGAT CAGCAGCGAG
CTCTGCCATG CCCTGGACTT GCTGGCGCAG CACCGCGACA GCCTGGACAA CGACAGCCAG
GCGTTGGTCG ACGACCTGCA ACAGCAACGT GAAGGCCTTG CCCAGCACAT CGCCAACTTG
GCCAGGCAGG CCCAGGGTGG CCTGCTGATG CGGGTTCACG GCGACCTGCA CCTGGGCCAG
GTGCTGGTGG TGCAAGGGGA TGCCTACCTC ATCGATTTCG AAGGCGAGCC TTCGCGTGCA
CTGCAAGAGC GGCGTGCCAA GCACAGCCCG TACAAGGATG TCAGCGGCGT GTTGCGATCC
TTCGACTATG CTGCTGCGAT GATCCTGCGC AGCGCCTCGG CGGTAGACGC TTCCGAGGCG
GCACGGCAGG CTCGTCAGCG GGTCGCCCGG CAGTACCTGC ACCAGTCGCG CCACGCCTTC
GTCGAAGCCT ATGGCCTGGC CACCGCCGCC ATGCCTCACG CCTGGCAACA GGCCGAGGGC
GAGCGCGCCG CACTGGAACT GTTCTGCCTG GAAAAGGCCG CCTACGAGAT TACTTATGAA
GCCGAAAACC GGCCAAGTTG GCTGGCCGTG CCTTTGCATG GCTTGCATGG ATTGATCAGT
ACCTGGGGAG AGTCATAG
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| Protein sequence | MAKRSRPAAF LDDPLWYKDA VIYQLHIKSF FDANNDGIGD FAGLISKLDY IADLGVNTLW
LLPFYPSPRR DDGYDIAEYK AVHPDYGSMA DARRFIAEAH KRGLRVITEL VINHTSDQHP
WFQRARHAKR GSKARDFYVW SDDDQKYDGT RIIFLDTEKS NWTWDPVAGQ YFWHRFYSHQ
PDLNFDNPQV LKAVIGVMRF WLDLGVDGLR LDAIPYLIER DGTNNENLPE THKVLKAIRA
EIDANYPDRM LLAEANQWPE DTRPYFGEGD GDECHMAFHF PLMPRMYMAL AMEDRFPITD
ILRQTPEIPA NCQWAIFLRN HDELTLEMVT DRERDYLWNY YAQDRRARIN LGIRRRLAPL
LQRDRRRIEL LTSLLLSMPG TPTLYYGDEL GMGDNIYLGD RDGVRTPMQW SPDRNGGFSK
ADPQRLVLPP IMDPLYGYQT VNVEAQAHDP HSLLNWNRRL LAVRNQQKAF GRGTLRTLAP
SNRRILAYIR EYTDAEGNSE VILCVANVSR AAQAAELELS QYADKVPVEM LGGSAFPPIG
QLPFLLTLPP YAFYWFLLAA HDRMPSWHVQ ATEGLPELTT LVLRKRMEEL LETPSSDTLQ
DAILPQYLPK RRWFAGKEGP VDQVRLCYGV RLGTATTPVL LSEIEVLGDG VANRYQLPFG
LLPEDQINSA LPQQLAMSRV RRGRQVGLIT DAFVLEPFIR AVLRACQDGL RLPCGNGQGE
LRFHCTEALA SLGLDEDSAV RYLSAEQSNS SVVVGDRVVL KLIRRVNPGV HPELEMSAYL
TAAGFANISP LLAWVSRVDE TDAPHLLMIA QGYLSNQGDA WAWTQNTLER AIRDEMEPSS
NDGEAHTDAL AELNGFAALL GQRLGEMHLL LAAPTDDPAF RPRSSDGEDS ERWAQQISSE
LCHALDLLAQ HRDSLDNDSQ ALVDDLQQQR EGLAQHIANL ARQAQGGLLM RVHGDLHLGQ
VLVVQGDAYL IDFEGEPSRA LQERRAKHSP YKDVSGVLRS FDYAAAMILR SASAVDASEA
ARQARQRVAR QYLHQSRHAF VEAYGLATAA MPHAWQQAEG ERAALELFCL EKAAYEITYE
AENRPSWLAV PLHGLHGLIS TWGES
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