| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1796 |
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| Symbol | |
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| ID | 6110747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1997984 |
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| End bp | 2000254 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641621592 |
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| Product | GAF sensor signal transduction histidine kinase |
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| Protein accession | YP_001748669 |
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| Protein GI | 170720981 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.232536 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGGAG CGTATCCATT GACGACCACA GACATCGCAC TCGCCGAAGC CGTGGAACGC
TGCGCCCAGG AGCCGATCCA GGTACCTGGC AGCATCCAGC CCCACGGCTT TCTGCTGGTG
CTGGACGAAC AGGACCTGCG TATCCTCCAG GCCAGCGACA ATGTCGAACG CTGGCTAGGC
GTGCCCGCCC GTGAACTACT GGGGTGCACC TTCGCCGACG TGGTCAGCGA CAGTTTCGAC
CTGCGCGCCC ATCTTGAGCG CCTGCCCGGC GACGACGTGT TCCCCTTCCA TATCGGCGAT
GTCCACCTGC GCAACGGGGC ACCCTGCGGC GACCGGCTAC GCCTGCTGAC CCATCGCCAT
GATCAGGTAC TGATCGCAGA GTTCGAGCCC GTGCGTCAGC CTCTCGGCCC GGTCGACCAA
GGCGACTATT ACCCACTGGT GCGTGGTTTC GTCAGTAGCC TCAACAACGC CGCAACCCTG
GAAGAGTTGC TGCAGCAGAC TGTATTGCAG ATAAAGCGAA TCACGGGGTT TGGCCGGGTC
AAAGCTTACA GCTTCGATAC CGAGGGTAAT GGCCAGGTGC TGGCTGAAGT GGCCGATGCC
GGCTACCCCC GCTACCTGGG CCTATGCTTC CCGGCCTCGG ATATCCCCCG CCAGGCCCGC
GAGCTTTATA GGGTCAACCG CATCCGCGTG ATCGAGGATG CCAACTACCA GGCCGTACCC
CTGGTGCCGG CGGCCAACCC GCGCACCGGC AAGCCGCTGG ACATGAGTTT TGCCGCGTTG
CGCAGCGTGT CGCCGGTGCA CCTGCAGTAC ATGCGCAACA TGGGCACCAT GGCGTCGATG
TCACTGTCGA TCGTGGTCGG TGGGCAACTG TGGGGGCTGG TGTCATGCCA CCACGAGCAA
CCTCGCCCGG TCGACCTGCG CACCCGCACA GCCTGCGAGC TGCTGGCCAG TGTGCTGTCG
CTGCAGATCG AGTCGCGTGA GTCCCACGCC AATACCCGAA AACTGCTCGA CCTGCGCCAG
CACATCGTAC GGATGATCTC CTCGATGGCC GACCATGACA GTGTCAGCGA GGGCCTGCGC
GCCCTGCCCG AGGTGCTGCT GGCCTTCGCC GGGGCGAGCG GCGCGGCGGT CATTTCCGCC
GAGCGCTGCG ACCTGATTGG CCAGACACCG CCGGCAGCGC AGGTCACGGC ACTGGTGCAC
TGGCTGGCCC AGCGTGATGA TGAGACGGTG TTCCACAGTG ACAACGTACG CCGTGACATC
GACGAACTGC CCGAGCTGGC CGAGCATGTC GGTGGCGTGC TGGCAGTGGC CATTTCCCAG
ATCCACTCAC ACTACCTGCT GTGGTTCCGG CCCGAGCAGG TACGCACAGT CAACTGGGCC
GGGCGGCCCG ACAAACAGAT AGGCCCGCAG GGGGCGCTAA ACCCGCGGCA CAGCTTTGAA
CACTGGCAGG AACAGTTAGG CGGTTACTGC GAGCCGTGGG ACCCGCTGAC GATCGAAGGC
GTGGTCGAAC TGCGCACCGC AGTACTCGGC ATTGTCTTGC GCAAGGCAGA AGAGATGGCG
CAACTGGCAA ATGAACTACG CCGCTCGAAC AAAGAGCTCG AAGCCTTCAG CTACAGCGTG
TCCCATGACC TGCGCGCACC CTTGCGGCAT ATCGCCGGCT ATACCGAACT GCTCGGCGAA
ATCGAAGGCC AGGGCCTGAG CGAGCGCGGC CGGCGCTTTC TCAAACACAT CGAGGAGGCC
GCGCAGTTCG CCGGTAGCCT GGTGGATAAC CTGCTCAACT TCTCGCAGAT GGGCCGCTCG
GCGCTACGCC TTTCGGATGT CGACCTCAAT GCCTTGGTCG AAGCCATCCG CCAGGAACTG
GCGCCTGATT ACGAAGGGCG TGAGATCATC TGGGACGTGG CACCGCTGCC CAAGGTGATC
GGTGACCCGG CTTTCATCAA CCTGGCGCTG CACAACCTGA TCGCCAACGC CATCAAGTAC
ACCCGTGGTC GCGAGCCTGC ACGCATCGAA ATCGGCGCAC ACCAGCACGA AGAGGAAATC
GAAGTCTATA TTCGCGATAA TGGCGTGGGC TTCGACATGG CTTATGCCAA CAAACTCTTC
GGTGTGTTCC AGCGGCTGCA CCGCATGGAG GACTTCGAGG GCACCGGGAT CGGCCTGGCC
AGCGTGCGGC GGATCATCGA ACGTCATGAT GGACGAGTCT GGGCCCAAGG CCAGGTCGAC
CAGGGCGCCA GCTTCCATTT CACCCTTCCC CGTCATCCAG AAACAAACTG A
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| Protein sequence | MTGAYPLTTT DIALAEAVER CAQEPIQVPG SIQPHGFLLV LDEQDLRILQ ASDNVERWLG
VPARELLGCT FADVVSDSFD LRAHLERLPG DDVFPFHIGD VHLRNGAPCG DRLRLLTHRH
DQVLIAEFEP VRQPLGPVDQ GDYYPLVRGF VSSLNNAATL EELLQQTVLQ IKRITGFGRV
KAYSFDTEGN GQVLAEVADA GYPRYLGLCF PASDIPRQAR ELYRVNRIRV IEDANYQAVP
LVPAANPRTG KPLDMSFAAL RSVSPVHLQY MRNMGTMASM SLSIVVGGQL WGLVSCHHEQ
PRPVDLRTRT ACELLASVLS LQIESRESHA NTRKLLDLRQ HIVRMISSMA DHDSVSEGLR
ALPEVLLAFA GASGAAVISA ERCDLIGQTP PAAQVTALVH WLAQRDDETV FHSDNVRRDI
DELPELAEHV GGVLAVAISQ IHSHYLLWFR PEQVRTVNWA GRPDKQIGPQ GALNPRHSFE
HWQEQLGGYC EPWDPLTIEG VVELRTAVLG IVLRKAEEMA QLANELRRSN KELEAFSYSV
SHDLRAPLRH IAGYTELLGE IEGQGLSERG RRFLKHIEEA AQFAGSLVDN LLNFSQMGRS
ALRLSDVDLN ALVEAIRQEL APDYEGREII WDVAPLPKVI GDPAFINLAL HNLIANAIKY
TRGREPARIE IGAHQHEEEI EVYIRDNGVG FDMAYANKLF GVFQRLHRME DFEGTGIGLA
SVRRIIERHD GRVWAQGQVD QGASFHFTLP RHPETN
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