| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1783 |
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| Symbol | |
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| ID | 6110733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1984637 |
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| End bp | 1984993 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641621578 |
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| Product | queuosine biosynthesis protein QueD |
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| Protein accession | YP_001748656 |
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| Protein GI | 170720968 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0720] 6-pyruvoyl-tetrahydropterin synthase |
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| TIGRFAM ID | [TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.450226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0178443 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAATCT TTAAGGAATT TACCTTCGAA TCGGCCCACC GCCTGCCTAA CGTCCCTGCC
GGGCACAAAT GCGGCCGCCT GCATGGCCAC TCGTTCAAGG TCGGCCTGCA CCTGACCGGC
CCGCTTGACC CGCACACCGG CTGGATCCGC GACTTTTCCG AGATCAAGGC GATCTTCAAG
CCGATCTACG AGCAGTTGGA CCACAACTAC CTCAACGATA TTCCAGGCCT GGAAAACCCC
ACCAGCGAAG TCATCGCCAA GTGGATCTGG GAGCAGGTCA AGCCGCTGCT GCCGGAGCTG
TCCAAGGTGC GTATTCATGA AACCTGCACC AGCGGCTGCG AATACAGCGG CGATTGA
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| Protein sequence | MEIFKEFTFE SAHRLPNVPA GHKCGRLHGH SFKVGLHLTG PLDPHTGWIR DFSEIKAIFK
PIYEQLDHNY LNDIPGLENP TSEVIAKWIW EQVKPLLPEL SKVRIHETCT SGCEYSGD
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