| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1777 |
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| Symbol | |
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| ID | 6110727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1974692 |
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| End bp | 1977280 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641621572 |
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| Product | aconitate hydratase |
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| Protein accession | YP_001748650 |
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| Protein GI | 170720962 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01341] aconitate hydratase 1
[TIGR02333] 2-methylisocitrate dehydratase, Fe/S-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00224724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000953384 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACACTG CATACCGCAA AGCCCTGCCA GGCACTGACC TGGACTATTT CGACGCCCGT
GCTGCGGTCG AGGCCATCAA GCCCGGTGCC TACGACAGCC TGCCTTACAC CTCGCGCGTG
CTCGCCGAAA ACCTGGTGCG CCGCTGCGAC CCTGCAACCC TGAGCGCCTC GCTCGGCCAG
CTGATCGAAC GCAAGCGTGA TCTTGACTTC CCGTGGTTCC CGGCCCGCGT GGTGTGCCAC
GACATCCTCG GCCAGACCGC GCTGGTCGAC CTCGCCGGCC TGCGTGACGC CATCGCCGAA
AAAGGCGGCG ACCCGGCGGC GGTCAACCCT GTCGTGCCGG TGCAACTGAT CGTCGATCAC
TCGCTGGCCG TCGAGTGCGG TGGCTTCGAC CCGCAGGCCT TTGACAAGAA CCGCGCCATC
GAAGACCGTC GCAACGAAGA CCGCTTCCAT TTCATCAACT GGACCAAGAA GGCGTTCAAG
AACGTCGATG TGATCCAGCC CGGTAACGGC ATCATGCACC AGATCAATCT GGAGAAAATG
TCGCCGGTAA TTCACAACGA TCGCGGTGTT GCCTACCCGG ACACCTGCGT GGGCACCGAC
AGCCATACTC CACATGTCGA CGCCCTGGGC GTGATCGCCA TCGGCGTCGG CGGCCTCGAA
GCTGAAAATG TCATGCTGGG CCGCGCCTCC TGGATGCGCC TGCCGGAAAT TGTCGGCGTG
GAGCTCAGCG GCAAGCTGGC GCCCAACATC ACCGCCACCG ACCTGGTGCT GGCCTTGACC
GAGTTCCTGC GCAAGCAGAA GGTGGTTGGC GCCTACCTTG AGTTCTACGG CGAAGGTGCA
CGCGCCCTGA CCCTCGGCGA CCGTGCGACC ATCTCCAACA TGGCACCGGA ATATGGTGCA
ACCGCTGCAA TGTTCGCCAT CGACCAGCAA ACCATCGACT ACCTGAAACT GACCGGCCGT
GAAGATCAGC AGGTTAAACT GGTGGAGACC TACGCCAAGG CCACGGGTTT GTGGGCTGAC
GCGTTGGTGA AGGCCGAATA CGAACGCGTG CTGAGCTTCG ACCTGTCGAG CGTGGTGCGC
AACATGGCCG GGCCGTCCAA CCCGCATGCC CGTGTTGCCA CCAGTGAGCT GGCAGCCAAG
GGCATCGCTG GTGCCTGGGA CGAGATACCG GGGCAGATGC CTGACGGCGC AGTGATCATC
GCTGCGATTA CCAGTTGCAC CAACACCAGC AACCCGCGCA ACGTGATCGC AGCTGGCCTG
CTGGCACGCA ATGCCAACAA GCTCGGCCTG GCACGCAAGC CGTGGGTCAA GTCTTCGCTC
GCGCCCGGCT CCAAGGCAGT GCAGCTGTAC CTGGAGGAAG CGGGGCTGGA GAAGGAGCTG
GAGCAACTGG GCTTCGGTAT CGTCGCTTTC GCCTGCACCA CCTGCAACGG CATGTCCGGT
GCTTTGGACC CGGTGATTCA GCAGGAAATC ATCGACCGTG ACCTCTACGC GACGGCGGTG
CTCTCGGGCA ACCGCAACTT CGATGGGCGC ATCCACCCGT ACGCCAAGCA GGCATTCCTC
GCTTCGCCGC CGCTGGTGGT GGCCTATGCC ATTGCCGGCA CTATCCGCTT CGACATCGAG
AAGGATGTAC TGGGCGTAGT CGATGGTCAG GAGATCCGCC TCAAGGACAT CTGGCCAAGC
GACGAAGAGA TCGACGCGGT GGTGCGCGCG GCGGTCAAAC CGGAGCAGTT CCGCAAGGTC
TACATCCCGA TGTTCGCTAT CGAGGAAGAC CGTGGGCCGA AAGTGGCGCC GCTTTACGAG
TGGCGTCCGA TGAGTACCTA TATCCGCCGC CCGCCCTACT GGGAAGGCGC CCTGGCCGGT
GAGCGCACGT TGCGCGGCAT GCGTCCGTTG GCGGTGCTGC CGGACAACAT CACCACCGAC
CACCTGTCAC CTTCCAATGC CATTCTGCTC GACAGCGCGG CGGGTGAATA CCTGGCCAAG
ATGGGCTTGC CGGAGGAGGA CTTCAACTCC TACGCCACGC ACCGCGGCGA CCACCTGACG
GCACAGCGTG CCACATTCGC CAACCCCAAG CTGTTCAACG AGATGGTGCG CAAACCCGAT
GGCAGCGTGC AGCAGGGTTC GCTGGCGCGC CTGGAGCCGG AGGGCAAGGT GACCCGGATG
TGGGAAGCCA TCGAAACCTA CATGCAGCGC AAGCAGCCGC TGATCATCGT TGCCGGTGCC
GACTATGGGC AAGGCTCGTC CCGCGACTGG GCGGCCAAGG GCGTGCGGCT GGCGGGCGTC
GAGGCGATCG TGGCCGAAGG CTTCGAGCGC ATTCACCGCA CCAACCTGGT GGGCATGGGC
GTCCTGCCGC TGGAATTCCT GCCGGGGACC GACCGCAAGA CCCTGGGCCT GGATGGCAGC
GAGACCTATG ACGTGGCAGG TGAGCGCAAG CCGCGTGCAA CCCTGACGCT GGTGGTTACG
CGCCGCAATG GCGAACGGGT CGAGGTGCCG GTGACCTGCC GGCTCGATAC CGCCGAAGAG
GTGTCGATCT ACGAGGCGGG CGGGGTACTG CAGCGCTTCG CCCAGGATTT CCTCGAAGCC
ACCGCCTGA
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| Protein sequence | MNTAYRKALP GTDLDYFDAR AAVEAIKPGA YDSLPYTSRV LAENLVRRCD PATLSASLGQ
LIERKRDLDF PWFPARVVCH DILGQTALVD LAGLRDAIAE KGGDPAAVNP VVPVQLIVDH
SLAVECGGFD PQAFDKNRAI EDRRNEDRFH FINWTKKAFK NVDVIQPGNG IMHQINLEKM
SPVIHNDRGV AYPDTCVGTD SHTPHVDALG VIAIGVGGLE AENVMLGRAS WMRLPEIVGV
ELSGKLAPNI TATDLVLALT EFLRKQKVVG AYLEFYGEGA RALTLGDRAT ISNMAPEYGA
TAAMFAIDQQ TIDYLKLTGR EDQQVKLVET YAKATGLWAD ALVKAEYERV LSFDLSSVVR
NMAGPSNPHA RVATSELAAK GIAGAWDEIP GQMPDGAVII AAITSCTNTS NPRNVIAAGL
LARNANKLGL ARKPWVKSSL APGSKAVQLY LEEAGLEKEL EQLGFGIVAF ACTTCNGMSG
ALDPVIQQEI IDRDLYATAV LSGNRNFDGR IHPYAKQAFL ASPPLVVAYA IAGTIRFDIE
KDVLGVVDGQ EIRLKDIWPS DEEIDAVVRA AVKPEQFRKV YIPMFAIEED RGPKVAPLYE
WRPMSTYIRR PPYWEGALAG ERTLRGMRPL AVLPDNITTD HLSPSNAILL DSAAGEYLAK
MGLPEEDFNS YATHRGDHLT AQRATFANPK LFNEMVRKPD GSVQQGSLAR LEPEGKVTRM
WEAIETYMQR KQPLIIVAGA DYGQGSSRDW AAKGVRLAGV EAIVAEGFER IHRTNLVGMG
VLPLEFLPGT DRKTLGLDGS ETYDVAGERK PRATLTLVVT RRNGERVEVP VTCRLDTAEE
VSIYEAGGVL QRFAQDFLEA TA
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