| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1743 |
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| Symbol | clpX |
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| ID | 6110693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1939798 |
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| End bp | 1941081 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641621538 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_001748616 |
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| Protein GI | 170720928 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00311548 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGACA CCCGTAACGG CGAGGACAGC GGCAAATTGC TTTATTGCTC CTTCTGCGGC
AAAAGCCAGC ACGAAGTGCG CAAACTGATT GCCGGGCCCT CGGTATTTAT CTGCGACGAG
TGCGTCGACC TGTGCAACGA CATCATCCGT GAGGAGGTGC AGGAAGCCCA GGCCGAAAGC
AGCGCGCACA AATTGCCTTC GCCGAAAGAA ATCAGCGGCA TCCTGGACCA GTATGTGATT
GGTCAGGAAC GCGCCAAGAA GGTGCTTTCG GTAGCGGTGT ACAACCACTA CAAGCGCCTG
AACCAGCGTG ACAAGAAAGG TGACGAGGTT GAACTCGGCA AGAGCAACAT CCTGCTTATC
GGGCCTACAG GCTCGGGCAA GACCCTGCTC GCCGAAACCC TGGCTCGCCT GTTGAACGTG
CCGTTCACCA TTGCCGACGC CACCACCCTG ACCGAAGCCG GTTACGTGGG TGAGGACGTC
GAGAACATCA TTCAGAAACT GCTGCAGAAG TGCGACTACG ACGTGGAAAA GGCCCAAATG
GGCATTGTCT ATATCGACGA GATCGACAAG ATCTCGCGCA AGTCGGACAA CCCGTCGATC
ACCCGTGACG TTTCGGGTGA AGGCGTGCAG CAGGCACTGC TCAAGCTGAT CGAGGGCACC
GTTGCCTCCG TTCCGCCGCA AGGGGGGCGC AAGCACCCGC AACAGGAATT CCTGCAGGTA
GATACCCGCA ACATCCTGTT CATCTGCGGT GGCGCCTTCT CTGGTCTGGA AAAGGTCATC
CAGAACCGCT CCACCAAGGG TGGTATCGGT TTTGGCGCTG AAGTGCGCAG CAAGGAAGAG
GGCAAGAAGG TTGGTGAATC GCTGCGTGAA GTCGAGCCGG ATGATCTGGT CAAGTTTGGC
CTGATCCCCG AGTTCGTCGG CCGTCTGCCG GTTCTGGCAA CCCTCGACGA GTTGGATGAG
GCCGCGCTGA TGCAGATCCT CACCGAGCCG AAGAACGCTC TGACCAAACA GTACGCCAGG
CTGTTCGAGA TGGAAAGCGT GGACCTGGAG TTCCGCAGTG ATGCGCTCAA GGCCGTCGCA
CGCAAAGCTC TGGAACGCAA GACTGGCGCC CGTGGCCTGC GTTCGATCCT CGAAGGCGTG
CTGCTCGACA CCATGTATGA GATTCCTTCG CAGAAGGAAG TCAGCAAGGT GGTGATCGAC
GAAAGCGTCA TCGAAGGCAC TTCGCAGCCT TTGCTGATCT ACGAGAACAG CGAGCCGCAA
GCCAAGGCCG CACCCGACGC CTGA
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| Protein sequence | MTDTRNGEDS GKLLYCSFCG KSQHEVRKLI AGPSVFICDE CVDLCNDIIR EEVQEAQAES
SAHKLPSPKE ISGILDQYVI GQERAKKVLS VAVYNHYKRL NQRDKKGDEV ELGKSNILLI
GPTGSGKTLL AETLARLLNV PFTIADATTL TEAGYVGEDV ENIIQKLLQK CDYDVEKAQM
GIVYIDEIDK ISRKSDNPSI TRDVSGEGVQ QALLKLIEGT VASVPPQGGR KHPQQEFLQV
DTRNILFICG GAFSGLEKVI QNRSTKGGIG FGAEVRSKEE GKKVGESLRE VEPDDLVKFG
LIPEFVGRLP VLATLDELDE AALMQILTEP KNALTKQYAR LFEMESVDLE FRSDALKAVA
RKALERKTGA RGLRSILEGV LLDTMYEIPS QKEVSKVVID ESVIEGTSQP LLIYENSEPQ
AKAAPDA
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