Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1741 |
Symbol | tig |
ID | 6110691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 1937643 |
End bp | 1938956 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641621536 |
Product | trigger factor |
Protein accession | YP_001748614 |
Protein GI | 170720926 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00658695 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCAAGTTT CTGTTGAAAA CACTTCCGCT CTCGAGCGCC GCATGACCAT CGCCGTTCCG GCCGAGCGCG TCGAGAACGA AGTCAACAAG CGTCTGCAGC AGACTGCCAA GCGCGCCAAG GTCGCGGGCT TCCGCCCAGG CAAAGTGCCG ATGAGCGTGA TCCGCCAGCG TTTCGAAGCC GATGCTCGTC AAGAGGCCTT CGGTGACCTG GTCCAGGCTT CCTTCTACGA AGCCATCGTC GAGCAGAAAC TGAACCCGGC TGGCGCGCCT GCTGTAGAGC CGAAGTCCTT CGAAAAGGGC AAGGATCTGG AATTCGTCGC CATTTTCGAG GTGTTCCCAG AGTTCGCCGT TGCCGGCCTG GAGTCGATCA GCGTCGAGCG CCTGAGTGCC GAAGTGACTG ACGCCGACCT GGACAACATG CTGGAAGTGC TGCGCAAGCA GAACGTGCGC TTCGAGGCCG TTGAGCGTGC TGCCGAGAAA GATGACCAGG TCAACATCGA CTTCGTCGGC AAGATCGACG GTGAAGCCTT CGCCGGTGGT TCGGCCAAGG GCACCCAGCT GGTACTGGGC TCCGGCCGCA TGATCCCAGG CTTCGAAGAC GGCCTGGTTG GTGCCAAGGC TGGCGAAGAG CGCGTTGTCA ACGTGACCTT CCCTGAGGAT TACCAGAACC TGGACCTGGC TGGCAAAGCT GCCGAGTTCA CCATCACCGT CAACAGCGTT TCGGCACCTC AGCTGCCAGA ACTGAACGAA GAGTTCTTCG CCCAGTTCGG CATCAAGGAA TCGACCCTGG AAGGCTTCCG TGCCGAAGTT CGCAAGAACA TGGAGCGTGA ACTGCGTCAG GCGATCAAGA CCAAGGTGAA GAACCAGGTC ATGGACGGTC TGCTGGCCGC CAATCCGATC GAAGTGCCAA AAGCTCTGCT GGAAAATGAA GTCAACCGCC TGCGCGTCCA GGCTGTTCAG CAGTTCGGTG GCAACATCAA GCCTGAGCAG CTGCCAGCCG AGCTGTTCGA AGAGCAAGCC AAGCGTCGTG TGGTGCTGGG CCTGATCGTC GCCGAAGTGG TCAAGCAGTT CGAGCTGAAG CCGGACGAAG GCAAGGTTCG CGAAATGATC GAAGAAATGG CTTCGGCTTA CCAGGAGCCT GAGCAGGTCA TCGCTTGGTA CCTTAAAAAC GACCAGCAGA TGAACGAAGT GCGTTCGGTT GTGCTGGAAG AGCAAGTTGT AGATACTGTT CTGCAGAAAG CTACTGTGAC CGACAAATCG GTCTCGTACG AAGAAGCCGT AAAACCAGCG CAGGCGCCTG CCGAAGCTGA GTAA
|
Protein sequence | MQVSVENTSA LERRMTIAVP AERVENEVNK RLQQTAKRAK VAGFRPGKVP MSVIRQRFEA DARQEAFGDL VQASFYEAIV EQKLNPAGAP AVEPKSFEKG KDLEFVAIFE VFPEFAVAGL ESISVERLSA EVTDADLDNM LEVLRKQNVR FEAVERAAEK DDQVNIDFVG KIDGEAFAGG SAKGTQLVLG SGRMIPGFED GLVGAKAGEE RVVNVTFPED YQNLDLAGKA AEFTITVNSV SAPQLPELNE EFFAQFGIKE STLEGFRAEV RKNMERELRQ AIKTKVKNQV MDGLLAANPI EVPKALLENE VNRLRVQAVQ QFGGNIKPEQ LPAELFEEQA KRRVVLGLIV AEVVKQFELK PDEGKVREMI EEMASAYQEP EQVIAWYLKN DQQMNEVRSV VLEEQVVDTV LQKATVTDKS VSYEEAVKPA QAPAEAE
|
| |