Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1710 |
Symbol | |
ID | 6110656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 1902752 |
End bp | 1904569 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641621501 |
Product | ABC transporter |
Protein accession | YP_001748583 |
Protein GI | 170720895 |
COG category | [R] General function prediction only |
COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.732673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATGA ACTGGCACCA GGCCCTGCAA GAGAGCCTGA GCTGGCTTGC AATCGCTTCG TTCATCACCC TGATCGGCTT CACTGCCGCC GCTGCGCTGG CTGTGCGCTA CACGCGCTGG GGTAGCCAGT TCTGGCAGCT TGCCGGGCCC TATTTCTCCC TCAGGCGCAG TTGGCGACCG CTGCTGGTGT TTGCCGCACT GCTGGTGCTG ACCCTGTTTT CGGTACGCAT GAACGTGCTG TTCTCGTTCT GGTACAACGG CTTCTACAGT GCCCTGCAGG CCCTTGACCA AACCGCCTTC TGGTATTTGC TGGGTGTGTT CGCGGTATTA GCCACCCTTC ATGTGCTACG TTCGCTGTTC ACCTTCTACG TGACCCAGGC CTTCAGCATC CGCTGGCGGG TCTGGCTGAC CGAGCGGCTG ACCAACGACT GGCTGCACGG TGACGCCTAT TACCGCGGCC AGTTTCTTGC CGAGCCCGTA GACAACCCCG ACCAGCGAAT CGAACTGGAC GTCAACGCCT TCGTCACCAA TTCGGTAACC CTGGCGCTGG GCGCGGTCAG CGCGCTGGTG TCGCTGGTGG CGTTCACCGC CATCCTTTGG GGGCTGTCGG CGCCGTTAGC GGTCACAGGT GTGGAAATCC CCCGGGCCAT GGTGTTTGCC GTGTATGTGT ATGTGCTGAT CGCTACCTGG ATCGCCTTCC GTCTCGGGCA GCCGTTGATC CGTCTGAACT TCCTCAACGA AAAACTCACC GCCAACTTCC GTTATGCGCT GATGCGCCTG CGTGAAAACG CTGAGAACAT CGCGTTCTAC CAGGGCGCGC AAGTGGAGCG GGGGACCTTG CTGGGCCGCT TCGGGGCATT GATCGTCAAT GTCTGGGCAC TGGTGTTCCG CAACCTGAAG TTCAGCGGTT TCAACCTGGG CGTCAGCCAG GTTGCGGTGG TGTTCCCGTT CATCCTACAG GCGCCGCGCT TCTTCAGCGG CGCGATCAAG CTGGGCGATG TCATGCAGAC GTCCCAAGCG TTTGGCCAGG TGCAGGATGC GCTGTCGTTC TTCCGCGAGT CCTACGACAC CTTTGCCCAG TACCGCGCCA CGCTCGACCG TCTGACCGGA TTTCTTGATG CCAACCAGCA GGCCAGCACC TTGCCACGTG TCAGCACCGA GGAACAGGCG CAGGCCCTTG CTATCTCGGG CCTGCAAGTG ATGCGCCCCG ACGGCCAAGC GCTGATCGCC GACCTCGACT TGCAGCTGCA GGCCGGCCAG GCACTGCTGA TCAAGGGCCC GTCGGGTAGT GGCAAGACCA CCTTGTTGCG TGCCTTGGCA GGGCTGTGGC CTTACGCCGA GGGTGAGGTC AGGCGGCCCA CCGGCACTGA GGCGCTGTTC CTCTCGCAGC GCCCGTACCT GCCCCTGGGT GACCTGCGAA CCGCCATCGC CTACCCGGCT GACAGCAAGC CGGAGGACGA GGCGCGCATG CAGCAGGCGC TGCGCCAGGT CAACCTGGCC CACCTGGCTG AGCGGCTGGC GGTCAGTTGC GACTGGTCGC ATATTCTCTC GGTCGGTGAG CAGCAGCGGC TGGCGTTTGC CCGGGTGCTG TTCAACCGGC CGCAGGTGGT GTTCCTCGAC GAATCCACCT CGGCGATGGA TGAAGGCCTG GAGCATGCGT TGTATTCGCT GCTGCGCAAC GAAATGCCAC AAACCTTGCT GGTGAGTGTT GGCCATCGCA GCACGTTGGC CGGGTTCCAT ACCCACCGGC TGGAAGTGGA CGGGCAGGGT GGTTGGTCGC TGCTGGAGCA AAAGCCGGAG GTAGAGATGC AGGTCTAG
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Protein sequence | MDMNWHQALQ ESLSWLAIAS FITLIGFTAA AALAVRYTRW GSQFWQLAGP YFSLRRSWRP LLVFAALLVL TLFSVRMNVL FSFWYNGFYS ALQALDQTAF WYLLGVFAVL ATLHVLRSLF TFYVTQAFSI RWRVWLTERL TNDWLHGDAY YRGQFLAEPV DNPDQRIELD VNAFVTNSVT LALGAVSALV SLVAFTAILW GLSAPLAVTG VEIPRAMVFA VYVYVLIATW IAFRLGQPLI RLNFLNEKLT ANFRYALMRL RENAENIAFY QGAQVERGTL LGRFGALIVN VWALVFRNLK FSGFNLGVSQ VAVVFPFILQ APRFFSGAIK LGDVMQTSQA FGQVQDALSF FRESYDTFAQ YRATLDRLTG FLDANQQAST LPRVSTEEQA QALAISGLQV MRPDGQALIA DLDLQLQAGQ ALLIKGPSGS GKTTLLRALA GLWPYAEGEV RRPTGTEALF LSQRPYLPLG DLRTAIAYPA DSKPEDEARM QQALRQVNLA HLAERLAVSC DWSHILSVGE QQRLAFARVL FNRPQVVFLD ESTSAMDEGL EHALYSLLRN EMPQTLLVSV GHRSTLAGFH THRLEVDGQG GWSLLEQKPE VEMQV
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