Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1671 |
Symbol | |
ID | 6110617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 1859422 |
End bp | 1860672 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641621463 |
Product | LolC/E family lipoprotein releasing system, transmembrane protein |
Protein accession | YP_001748545 |
Protein GI | 170720857 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.966628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.962664 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAGAC CTCTTTTCGC ATTCATTGGT ACGCGCTACA CCCGTGCCAA GCGCCGTAAT CACTTCGTCT CGTTCATTTC CCTGACCTCG ATGATCGGCC TCGCCCTGGG CGTGGTAGTG ATGATCGTGG TGCTCTCGGT AATGAACGGT TTCGACCACG AGATGCGTAC CCGCGTGCTG GGCATGGTCC CTCACGCCAC GCTCGAGAGC GGCCAGCCGA TCAACGACTG GCCTGCCCTT GCCCAACAAG TAAAGCAGAA TCCGCAGGTG CTGGCGGTTG CGCCCTATAC CCAGATGCAG GGCCTGCTGA CCTTTGATGG CAAGGTGCAG AAGGTGCTGC TCAATGGTAT CGACCCGGGC CGCGAGCGTG AGGTGTCGAT CATCGACAAC TTCATTCAGC AAGGCCGCCT TGATCAGCTG GCGCCAGGCG AGTGGGGCAT CATGATCGGT GACAAGGCGG CCGCCAAGCT GGGGGTGGCC ATCGGCGACA AGCTGACCTT CGTCGCCCCT GAAGTCAGCG TGACGCCGGC CGGCATGTTC CCGCGCATGA AGCGCTTCAC CGTGGTCGGC ACCTTCCACG TTGGTGCTGG CGAGATCGAC GGTTACCTGG GCCTGACCAA CATTGCCGAC CTTTCACGGC TGCACCGCTG GAAGGCGGAC CAGGTGCAGG GCCTGCGCCT GAAGTTCGAC GACCTGTTCC AGGCGCCACG TGTGGCCTGG AGCATCGCCC AGCAGTTGGG TGACCAGGAG TACTACAGCC GCGACTGGAC CCGTACCCAC GGCAACCTGT ACCAGGCGAT CCGCATGGAA AAAGCCATGA TCGGCCTGCT GCTGTTGCTG ATCGTTGCGG TGGCGGCGTT CAACATCATT TCCACCCTGG TGATGGTGGT CAACGACAAG CGTGGTGACA TCGCCATCCT CCGTACCCTT GGCGCCACGC CCGGGCAGAT CATGGCCATC TTCATGGTTC AGGGTACGGT GATCGGAGTC ATCGGCACCC TGATCGGTGC AGTGGTCGGT ATCCTTGCTG CGCTCAACGT CAGTGCGGCG ATCGCCGGCA TCGAGAAACT GATCGGGCAC AAGTTCCTCA ACGCTGACGT GTATTTCATC GATTACCTGC CCTCGCAGAT CCAGGCCCAG GATGTGTACA TGGTCTGCGG TGCGGCGCTG GTCCTGAGTT TCTTCGCCAC CCTGTACCCG GCCTGGCGTG CGGCCCGCAC CCAGCCTGCA GAGGCGCTAC GTTATGAGTG A
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Protein sequence | MFRPLFAFIG TRYTRAKRRN HFVSFISLTS MIGLALGVVV MIVVLSVMNG FDHEMRTRVL GMVPHATLES GQPINDWPAL AQQVKQNPQV LAVAPYTQMQ GLLTFDGKVQ KVLLNGIDPG REREVSIIDN FIQQGRLDQL APGEWGIMIG DKAAAKLGVA IGDKLTFVAP EVSVTPAGMF PRMKRFTVVG TFHVGAGEID GYLGLTNIAD LSRLHRWKAD QVQGLRLKFD DLFQAPRVAW SIAQQLGDQE YYSRDWTRTH GNLYQAIRME KAMIGLLLLL IVAVAAFNII STLVMVVNDK RGDIAILRTL GATPGQIMAI FMVQGTVIGV IGTLIGAVVG ILAALNVSAA IAGIEKLIGH KFLNADVYFI DYLPSQIQAQ DVYMVCGAAL VLSFFATLYP AWRAARTQPA EALRYE
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