| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1620 |
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| Symbol | |
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| ID | 6110565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1800548 |
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| End bp | 1801168 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641621411 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001748494 |
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| Protein GI | 170720806 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0222153 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTCCG TATTTATTGT CGATGACCAT CCCGTCATCC GCCTGGCTGT CCGTATGCTG
CTTGAAAACC AGAACTACAA AGTCGTAGGC GAATCGGACA ATGGCGTGGA CGCCATGCAG
ATGATCCGCG AAACGCTGCC CGACCTAGTG ATTCTCGATA TCAGCATCCC CAAGCTTGAT
GGCCTCGAGG TACTCTCGCG CTTTCAAACC ATGGCCTTGC CGCTGAAGGT GCTGATCCTG
ACTGCGCAAT CGCCCGCGCT GTTCGCCGTA CGCTGCATGC ACTCAGGTGC AGCAGGCTAT
GTATGCAAAC AGGAAGACCT GAGCGAACTG CTCAGCGCTA TCAAGGCGGT ACTTGCCGGA
TACAACTACT TTCCCAGCCA GGCCATCCAC ACCGGCCACG AAACAGCAGG CACTGATCTC
ACGCTTTTCC GCCAGGTCAA TGATCGCGAA CTGATGGTGC TGCAACTTTT CGCCCAAGGG
CGCAGCAACA AGGAAATTGC CAAAGGCATG TTTCTCAGCA ACAAGACCGT CAGCACTTAC
AAGAAGCGCC TGATGCAGAA GCTCCAGGTC GACACCTTGG TCGACCTTAT TGAAATGGCC
AAACGTAACG CGCTGGTCTG A
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| Protein sequence | MHSVFIVDDH PVIRLAVRML LENQNYKVVG ESDNGVDAMQ MIRETLPDLV ILDISIPKLD
GLEVLSRFQT MALPLKVLIL TAQSPALFAV RCMHSGAAGY VCKQEDLSEL LSAIKAVLAG
YNYFPSQAIH TGHETAGTDL TLFRQVNDRE LMVLQLFAQG RSNKEIAKGM FLSNKTVSTY
KKRLMQKLQV DTLVDLIEMA KRNALV
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