| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1606 |
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| Symbol | |
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| ID | 6110551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1780709 |
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| End bp | 1781275 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641621397 |
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| Product | RNA polymerase sigma factor SigX |
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| Protein accession | YP_001748480 |
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| Protein GI | 170720792 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000172032 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000000126876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGTTACG ACCCGCGCGA GCTCACCGAC GAGGAGTTGG TGGCGCGTTC GCATGAGGAG
CTGTATCACG TTACCCGCGC CTATGAAGAG CTCATGCGGC GCTACCAGCG GACCCTGTTC
AACGTGTGCG CGCGTTATCT GGGGAACGAC CGGGATGCTG ACGATGTCTG TCAGGAGGTG
ATGCTCAAGG TGCTTTACGG TCTGAAGAAC TTCGAGGGTA AATCCAAGTT CAAGACCTGG
CTCTACAGCA TTACCTATAA CGAGTGCATT ACCCAGTACC GCAAGGAGCG CCGCAAACGT
CGGTTGATGG ATGCCTTGAG TCTTGACCCT GTTGAAGAGG CGTCTGAAGA CAAGGCACCC
AAACCCGAAG AAAAGGGTGG CCTGGACAAG TGGCTGGTGT ATGTGAACCC GATCGACCGG
GAAATTCTGG TGCTGCGATT TGTTGCGGAA CTGGAATTTC AGGAGATCGC GGATATCATG
CACATGGGTC TGAGCGCAAC GAAAATGCGC TACAAGCGCG CGCTGGACAA GCTTAGAGAG
AAATTTGCAG GTTTGGATGA AACTTAG
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| Protein sequence | MRYDPRELTD EELVARSHEE LYHVTRAYEE LMRRYQRTLF NVCARYLGND RDADDVCQEV
MLKVLYGLKN FEGKSKFKTW LYSITYNECI TQYRKERRKR RLMDALSLDP VEEASEDKAP
KPEEKGGLDK WLVYVNPIDR EILVLRFVAE LEFQEIADIM HMGLSATKMR YKRALDKLRE
KFAGLDET
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