| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1585 |
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| Symbol | |
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| ID | 6110530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1753577 |
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| End bp | 1754815 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641621376 |
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| Product | nuclease SbcCD, D subunit |
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| Protein accession | YP_001748459 |
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| Protein GI | 170720771 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.583238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000717764 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTCTGT TTCACACCTC CGACTGGCAC CTGGGCCAAA GCCTGCACGG CCAGGAACGC
GACTTCGAAC ACGCCTGCTT CCTCGAATGG CTGCTCGGCC AGCTGCACCT GCGCCAGCCC
GACGCGCTGC TGATCGCCGG TGATATCTTC GACACGGTCA ACCCACCGGT CAAAGCCCAG
GAGCGGCTTT ACGACTTCAT CGTCCAGGCC CACGAGCAAC AGCCGAAGCT GGACATCGTG
ATGATCGCCG GCAACCATGA CTCCGGCTCG CGCATCGAGC TGCCTGCCGC GCTCATGCGC
CGCCTGCGCA CCCACGCGCT GGGCCGTGTG CACTGGCTCG ACGAAGGCCA GCTGGATGCC
GAACGCCTGC TGATCCCACT GACCAACGGC CGCGGCAAGG TGGCCGCCTG GTGCCTGGCC
CTGCCCTTCC TGCGCCCGGC CGAGGTCACC GGCCCGCAGT TGGGCGACGA CTACCTGCAG
GGCATCAACC AGGTGCACCA GCAACTGATC GCGGCCGCGC AGAAAAAACG CAAGAAGGAC
CAGGCGCTGG TCGCCATCAG CCACGCGCAC ATGGCCGGCG GTGCTGTGTC CGAAGACTCC
GAGCGCAGCC TGATCATCGG TAACGCCGAG GCCCTTCCGG CCAAACTGTT CGACAAGGCC
ATCAGCTACG TTGCCCTGGG CCACCTGCAC AAGCCGCAGA AGGTCAACCG CGAAACCCGC
ATACGTTATA GCGGCTCGCC GATCCCATTG TCGTTCGCTG AAATCAACTA TCCGCACCAG
GTGCTGGAAG TCGAGCTCGA GGGCACTGAA CTGGTCAGCG TCGAAGCGCG CCCGGTGCCC
CGTGCCGTAG CCCTGCAACG CATCGGCCCG GCGCCGCTGG GCGAATTGCT CGAACAGCTC
GCCGAGCTAC CTGAGATCGA CTTGCTCGAA GACCCCAACC GCCAGCCCTG GCTGGAGGTA
CGCGTGCGCT TGGACGAGCC TCAGCCGGAC CTGCGCCAGC AGATCGAAAA CGCCCTGCAA
GGCAAGGCGG TGCGGCTGAT TCGTATCAGT ACCGAATATG CCGGCCAGGG CAACGAGCAG
GACGACGACC AGGCATTCGT GGAACTGGCA CAGATGACCC CGCAGGACCT GTTCAGCCGC
GCTTGGGAAC AGGCCTACGG CAACCCCGTC GACGAGCAGG CCCTGGCCGA CTTCGCCCTG
CTGCTGCAGG ACGTCCAGCT GGAAGAGGAG CAGCCATGA
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| Protein sequence | MRLFHTSDWH LGQSLHGQER DFEHACFLEW LLGQLHLRQP DALLIAGDIF DTVNPPVKAQ
ERLYDFIVQA HEQQPKLDIV MIAGNHDSGS RIELPAALMR RLRTHALGRV HWLDEGQLDA
ERLLIPLTNG RGKVAAWCLA LPFLRPAEVT GPQLGDDYLQ GINQVHQQLI AAAQKKRKKD
QALVAISHAH MAGGAVSEDS ERSLIIGNAE ALPAKLFDKA ISYVALGHLH KPQKVNRETR
IRYSGSPIPL SFAEINYPHQ VLEVELEGTE LVSVEARPVP RAVALQRIGP APLGELLEQL
AELPEIDLLE DPNRQPWLEV RVRLDEPQPD LRQQIENALQ GKAVRLIRIS TEYAGQGNEQ
DDDQAFVELA QMTPQDLFSR AWEQAYGNPV DEQALADFAL LLQDVQLEEE QP
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