Gene PputW619_1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1530 
Symboltmk 
ID6110464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand+ 
Start bp1686731 
End bp1687354 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content67% 
IMG OID641621310 
Productthymidylate kinase 
Protein accessionYP_001748404 
Protein GI170720716 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.609014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTATTA CCCTGGAAGG CCCCGAAGGC GCGGGCAAAA GTACCAACCG TGATTACCTG 
GCTGCACGCC TGCGAGAGCA GGGGCTGGAT GTGGTGCTTA CCCGCGAGCC TGGCGGTACT 
CCGCTGGCTG AAAAAGTTCG CGAACTGCTG TTGGCACCGA GTGATGAGGT GATGGCCGCC 
GATACCGAGC TGCTGTTGGT GTTCGCCGCG CGCGCCCAGC ACCTGGCGCA GGTGATCCGC 
CCGGCGCTGG CCCGCGGGGC CGTGGTGCTG TGTGATCGTT TCACGGACGC TACCTACGCC 
TACCAAGGCG GTGGCCGCGG CCTTTCGGTA GAGCGGATCG CCGCGCTGGA GCAGTTTGTC 
CAAGGCGAGC TGCGCCCCGA CCTTACGCTG GTTTTCGACC TGCCGGTGGA AGTAGGGTTG 
GCCCGTGCTG CTGCCCGTGG GCGGCTGGAT CGTTTCGAGC AGGAGGGCCA AGCCTTCTTC 
GAGGCCGTGC GCCAGGCTTA CCTGCAGCGC GCTCGGCGCG AGCCGCAGCG CTACGATCTG 
CTGGACGCGG CGCAGCCGCT GGAAGCCGTG CAGCGCGCCA TTGACGCGCT GTTGCCGGGC 
ATCCTGGAGC GTTGCCGTGG CTGA
 
Protein sequence
MFITLEGPEG AGKSTNRDYL AARLREQGLD VVLTREPGGT PLAEKVRELL LAPSDEVMAA 
DTELLLVFAA RAQHLAQVIR PALARGAVVL CDRFTDATYA YQGGGRGLSV ERIAALEQFV 
QGELRPDLTL VFDLPVEVGL ARAAARGRLD RFEQEGQAFF EAVRQAYLQR ARREPQRYDL 
LDAAQPLEAV QRAIDALLPG ILERCRG