Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1481 |
Symbol | |
ID | 6110410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 1619706 |
End bp | 1620917 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641621256 |
Product | aminotransferase AlaT |
Protein accession | YP_001748355 |
Protein GI | 170720667 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTCA GCAAATCGAA CAAGCTCGCC AATGTCTGCT ACGACATTCG CGGCCCGGTG CTCAAGCACG CCAAACGCCT GGAAGAGGAA GGCCACCGCA TCCTCAAGCT GAACATCGGC AACCCGGCGC CGTTTGGCTT CGAAGCGCCG GACGAAATCC TCCAGGATGT GATCCGCAAC CTGCCCACTG CCCAGGGCTA CAGCGACTCC AAAGGCCTGT TCAGCGCGCG CAAGGCGGTG ATGCAGTACT GCCAGCAGAA GGAAATCGAG GGTGTCACCA TCGAGGACAT CTACCTGGGC AATGGTGTTT CCGAGCTGAT CGTCATGTCG ATGCAGGCAC TGCTCAACAA CGGCGACGAA GTGCTGATCC CGGCCCCCGA CTACCCGCTA TGGACCGCTG CGGTGAGCCT GGCAGGCGGC AAGCCGGTGC ATTACCTGTG CGACGAACAG GCCGACTGGT TCCCTGACCT TGAAGACATC AAGGCCAAGA TCACCCCGAA CACCAAGGCC CTGGTCATCA TCAACCCGAA CAACCCGACC GGCGCCGTCT ATTCCAAAGA GTTGCTGCTG GGCATGCTGG AGCTGGCACG CCAGCACAAC CTGGTGGTGT TCTCCGACGA GATCTACGAC AAGATCCTCT ATGACGAGGC CGTGCACATC AGCACCGCGT CACTGGCCCC GGACCTGCTG TGCCTGACCT TCAACGGCCT GTCCAAGTCG TACCGGGTGG CGGGCTTCCG CTCCGGCTGG CTGATCATCT CCGGGCCCAA GCACCACGCC CAGAGCTACA TCGAAGGCAT CGACATGCTG GCCAACATGC GCCTGTGCGC CAACGTACCG GCCCAGCACG CCATCCAGAC TGCGCTGGGC GGTTATCAGA GCATCAATGA CCTGGTGCTG CCCCCTGGCC GGCTGCTGGA GCAGCGCAAC CGCACCTATG AGCTGCTCAA TGACATCCCG GGGGTTAGCT GCGTCAAGCC GATGGGTGCG CTGTATGCCT TCCCGCGGAT CGACCCTAAA GTCTGCCCGA TCCTCAACGA CGAGAAGTTC GCGCTCGACC TGCTGCTGTC TGAGAAGCTG CTGATCGTCC AGGGCACGGC GTTCAACTGG CCTTGGCCGG ACCACTTCCG TGTGGTGACC TTGCCACGGG TGGATGACCT GGAGGCTGCG ATTGGCCGGA TTGGCAACTT CCTGCGCACG TATTCGCAGT AA
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Protein sequence | MQFSKSNKLA NVCYDIRGPV LKHAKRLEEE GHRILKLNIG NPAPFGFEAP DEILQDVIRN LPTAQGYSDS KGLFSARKAV MQYCQQKEIE GVTIEDIYLG NGVSELIVMS MQALLNNGDE VLIPAPDYPL WTAAVSLAGG KPVHYLCDEQ ADWFPDLEDI KAKITPNTKA LVIINPNNPT GAVYSKELLL GMLELARQHN LVVFSDEIYD KILYDEAVHI STASLAPDLL CLTFNGLSKS YRVAGFRSGW LIISGPKHHA QSYIEGIDML ANMRLCANVP AQHAIQTALG GYQSINDLVL PPGRLLEQRN RTYELLNDIP GVSCVKPMGA LYAFPRIDPK VCPILNDEKF ALDLLLSEKL LIVQGTAFNW PWPDHFRVVT LPRVDDLEAA IGRIGNFLRT YSQ
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