| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1468 |
|---|
| Symbol | |
|---|
| ID | 6110397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 1607601 |
|---|
| End bp | 1608170 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641621243 |
|---|
| Product | elongation factor P |
|---|
| Protein accession | YP_001748342 |
|---|
| Protein GI | 170720654 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
|---|
| TIGRFAM ID | [TIGR00038] translation elongation factor P |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTG GTAAAGAACT GAAACCCGGT ACCGTACTGC GGATCGACAA CGACCCGTGG
CTGGTTCAGA AAGCCGAGTT CACCAAATCG GGTCGCAACA GCGCGATCAT GAAGACCAAG
CTGAAAAACC TGCTGACCGG CTACAAGACC GAAACCGTTT ACGGTGCGGA CGACAAGCTG
GACGACGTGA TCCTGGATCG CAAAGAAGCG ACCCTGTCGT TCATCAGCGG TGACTCGTAC
ACCTTCATGG ACACCACCGA CTACACCATG TACGAGCTGA ACGCCGAAGA CATCGACGCC
GTTCTGCCGT ACATCGAAGA AGGCATGGAA GACATCTGCG AAGCCGTCTT CTTCGAAGGC
CGTCTGGTAT CGGTAGAGCT GCCGACCACC ATCAGCCGTC AGGTTGTCTA CACCGAGAAC
GCTGCGCGTG GCGACACCTC GGGCAAGGTC ATGAAGCCTG CCAAGCTGAA GAACGGTACC
GAGATCCAGG TTGCCGACTT CATCCAGATC GACGAGTGGA TCGACATCGA CACTCGCGAC
AACAGCTTCA AGGGCCGTTC CAAGAAGTAA
|
|---|
| Protein sequence | MKTGKELKPG TVLRIDNDPW LVQKAEFTKS GRNSAIMKTK LKNLLTGYKT ETVYGADDKL
DDVILDRKEA TLSFISGDSY TFMDTTDYTM YELNAEDIDA VLPYIEEGME DICEAVFFEG
RLVSVELPTT ISRQVVYTEN AARGDTSGKV MKPAKLKNGT EIQVADFIQI DEWIDIDTRD
NSFKGRSKK
|
|---|
| |