Gene PputW619_1462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1462 
Symbol 
ID6110391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp1601968 
End bp1603161 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content65% 
IMG OID641621237 
Productmajor facilitator transporter 
Protein accessionYP_001748336 
Protein GI170720648 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.554548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCC CAATCTTGAG CCGCGCCCTG ATCCTGCTGA TGGCTACCGC CACCGGCCTG 
GCCGTGGCCA GCAACTACTA CGCACAGCCA CTGCTGCACA GCATCGCCGA ACAGTTCGGC
CTGAGCACCG CCAGCGCCGG CAGCATCGTC ATTGCCGCGC AACTCAGCTA TGGCGCGGGC
CTTCTGCTGC TGGCGCCTTT GGGCGACCTG TTCGAGCAAC GCCGCCTGAT CGTGATCATG
TCGGTCATTT CCACCTTGGG CCTGGTGATC AGCGCCTGCG CCCCGAGCCT GCCCTGGCTG
ATCCTGGGGA CCGCGCTCAC CGGGCTGTTT TCGGTGGTGG CGCAGATCCT CGTGCCCATG
GCCGCCACGC TGAGTGAGCC GCATCAGCGC GGGCGCGCAG TGGGCACGCT GATGAGCGGC
TTGCTGCTGG GCATACTGCT GGCGCGTACC GCTGCCGGCT TCATGGCCGA ACTGGGTGGC
TGGCGCAGCA TCTATGTGCT GGCTGCGGTG CTGATGGCCG TCACCGCCTT TGCCCTGTAC
CGCAGCCTGC CACAACACCA CAGCCATGCC GGGCTGAAAT ACCCGGCACT GATCGGTTCT
GTATTCCGCC TGTTCATCGA GGAGCCAGTG CTGCGCCTGC GCTCGCTGCT GGGCTTGCTG
GCGTTCAGCC TGTTCGGGCT GTTCTGGACG CCGCTGGCGT TTCTGCTGGC GCGTGAGCCC
TACCATTATT CCGACGCGGT TATCGGCCTG TTCGGCCTTG CCGGCGCGGC AGGTGCGCTT
TCGGCCAACT GGGCCGGCCG CCTGGCTGAC CGTGGCAGAG GCTCGCTGGG CACCACAGTG
GGCCTGGTAG CGCTGTTGTT GTCATGGATA CCGCTGGGTT TCGCCGAAAG CTCGCTACTG
GCCTTGCTGC TCGGCGTACT GGTGCTGGAC CTGGCCGTGC AGCTGGTGCA TGTGAGCAAC
CAGAATGCAG TCATCGCCTT GCGGCCCGAA GCACGTACCC GGCTCAATGC CGGTTACATC
ACCTGTTATT TCATCGGCGG CGCCCTAGGC TCCTTGCTGG GCACACAGTT GTTCCAGTAC
CAGGGCTGGA TGGGCATCGT GACGGCAGGG TTGCTGATCG GGGCGCTGGC GCTGCTGGTG
TGGGGTTGGG CCGAGCACAA GCGCAAGCGC GCCGTAAAGG CCTGTGCGGC ATGA
 
Protein sequence
MNTPILSRAL ILLMATATGL AVASNYYAQP LLHSIAEQFG LSTASAGSIV IAAQLSYGAG 
LLLLAPLGDL FEQRRLIVIM SVISTLGLVI SACAPSLPWL ILGTALTGLF SVVAQILVPM
AATLSEPHQR GRAVGTLMSG LLLGILLART AAGFMAELGG WRSIYVLAAV LMAVTAFALY
RSLPQHHSHA GLKYPALIGS VFRLFIEEPV LRLRSLLGLL AFSLFGLFWT PLAFLLAREP
YHYSDAVIGL FGLAGAAGAL SANWAGRLAD RGRGSLGTTV GLVALLLSWI PLGFAESSLL
ALLLGVLVLD LAVQLVHVSN QNAVIALRPE ARTRLNAGYI TCYFIGGALG SLLGTQLFQY
QGWMGIVTAG LLIGALALLV WGWAEHKRKR AVKACAA