Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1457 |
Symbol | |
ID | 6110386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 1595858 |
End bp | 1597174 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641621232 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_001748331 |
Protein GI | 170720643 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.724845 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACTT CGACCGAAGC GACGCACCCT GCCGCGCAAC TGAAGCCCGC GGCCCGCACA CGACAGCCCT TCTATAAAGC GATGTATTTC CAGGTTTTGC TGGGGATTGT CCTGGGTGGG CTCGTCGGAC ATTTCTGGCC AGATTTCGCC GCCTCACTAA AACCATTGGG TGATGCGTTC ATCAAGCTTA TCAAGATGAT CATCGGCCCT GTGGTGTTCT GTACCGTAGT GACCGGCATC GCGGGCATGC AAGACCTGAA AAAGGTCGGT CGTGTGGGAG GCAAGGCACT GCTTTACTTC GAGATAATTT CCACCGTCTC GCTAGTCATA GGGTTACTCG GCGGCCACCT GTTCAACCCA GGCGCCGGGT TTCACGTAAA CCCTGATTCA CTGGATGCCT CTGCAGTGAC AGGTTTTGCT GAGAAAGCGC AGCACCTGGG TATCGTCGAA TTCCTGATGA GTATCATCCC GAATACGTTC GTCTCAGCGC TGGCAGATGG CAACATCCTG TGCATTCTGC TGATTTCAGT ACTTTTTGGC TGTGCCTTGT CCGCAATGGG GGATAAAGGT AAGCCGGTGT ACACCATGAT CGAAGGCGTT TCGGGCGTGT TCTTCGGTAT TGTCCATATC ATCGCCAAGT TTTCAGCAGT CGGCGCATTT GGTGCAATCG CGTTTACCGT TGGCACGTAT GGCGCCGCAT CGCTGCTGCC GCTGCTCAAA TTGATCGCAA GCTTCTATGT GCTTTGCATA TTCTTCATCG TGCTGGTGTT GGGCTTCGTT GCAAGGCTTT GCGGGTTCAG CATCCTGCGG TTCGTCTCGT ATATCAAGGA TGAACTACTG ATTGTACTGG GCACCAGTTC ATCTGAAGTT GTGCTCCCCC AAATCATGGA GAAGATGGAA CGACTCGGTT GTTCGAAATC GGTCGTCGGC CTGGTAATAC CCACCGGCTA TTCCTTCAAC CTGGACGGCA CCAACATCTA TTTGACCATG GCTGTTCTGT TCATTGCTCA AGCACTCGAC ATTGAACTTA CGTGGGGGCA GCAACTGACC TTGATCATTG TTGCCATGCT GAGTTCAAAA GGTGCCAGCG GGGTTTCGGG GGCTGCGTTC GTGATGTTGA CCAGTACCTT GCTCGTCGTG CCCGTTGTGC CCGTTGCGGG AATGGTGCTG ATCTTGGGCA TCCACCGCTT TATGGGCACT GGCTTGGCGA TGACCAACCT CGTCGGGAAT GGTGTCGCAG CACTGGTTGT ATCCGCCTGG GAAAAAGAAC TGGATCGCGG CAAGCTGAAC CAGCAACTGC ACCCCACCAA ACACTGA
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Protein sequence | MNTSTEATHP AAQLKPAART RQPFYKAMYF QVLLGIVLGG LVGHFWPDFA ASLKPLGDAF IKLIKMIIGP VVFCTVVTGI AGMQDLKKVG RVGGKALLYF EIISTVSLVI GLLGGHLFNP GAGFHVNPDS LDASAVTGFA EKAQHLGIVE FLMSIIPNTF VSALADGNIL CILLISVLFG CALSAMGDKG KPVYTMIEGV SGVFFGIVHI IAKFSAVGAF GAIAFTVGTY GAASLLPLLK LIASFYVLCI FFIVLVLGFV ARLCGFSILR FVSYIKDELL IVLGTSSSEV VLPQIMEKME RLGCSKSVVG LVIPTGYSFN LDGTNIYLTM AVLFIAQALD IELTWGQQLT LIIVAMLSSK GASGVSGAAF VMLTSTLLVV PVVPVAGMVL ILGIHRFMGT GLAMTNLVGN GVAALVVSAW EKELDRGKLN QQLHPTKH
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