Gene PputW619_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1425 
Symbol 
ID6110353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp1565128 
End bp1565889 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content65% 
IMG OID641621199 
Productshort chain dehydrogenase 
Protein accessionYP_001748299 
Protein GI170720611 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.857979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.357324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGA CCTTTTCCGG CCAGGTAGCA CTGGTCACTG GCGGTGCGGC GGGTATCGGC 
CGGGCGACGG CACTGGCGTT TGCCCGTGAG GGCCTCAAAG TGGTGGTGGC CGACCTCGAC
CCGGTCGGTG GAGAGGGCAC CGTGGCGTTG ATCAAAGATG CCGGTGGCCA GGCGCTGTTC
GTGGCCTGTG ATGTGACCCG TGACGCTGAT GTGCGCCGGC TGCATGAGCA GGTCATCCAG
GCCTACGGTC GCCTGGACTA TGCCTACAAC AATGCCGGTA TCGAAATCGA GCAGGGCCGC
CTGGCTGAGG GCAGCGAGGC TGAGTTCGAC GCCATCATGG GCGTCAACGT CAAAGGGGTG
TGGCTGTGCA TGAAGTACCA GCTGCCGCTG TTGCTGGCCC AGGGCGGCGG GGCGATCGTC
AATACTGCCT CGGTGGCAGG CTTGGGCGCG GCGCCGAAGA TGAGCATCTA CAGCGCGTCC
AAGCACGCGG TGATCGGCCT GACCAAATCG GCGGCCATCG AATATGCCAA GAAGCGCATC
CGGGTGAATG CGGTGTGCCC AGCGGTGATC GATACCGACA TGTTCCGCCG CGCCTACGAG
GCCGACCCAC GCAAGGCCGA GTTCGCCGCC GCGATGCACC CGGTCGGGCG CATCGGCAAG
GTCGAGGAAA TCGCCAGTGC GGTGTTGTAC CTGTGCAGTG ATGGAGCTGC GTTCACTACC
GGGCACAGCC TTACGGTGGA CGGTGGGGCC ACGGCTATTT GA
 
Protein sequence
MSMTFSGQVA LVTGGAAGIG RATALAFARE GLKVVVADLD PVGGEGTVAL IKDAGGQALF 
VACDVTRDAD VRRLHEQVIQ AYGRLDYAYN NAGIEIEQGR LAEGSEAEFD AIMGVNVKGV
WLCMKYQLPL LLAQGGGAIV NTASVAGLGA APKMSIYSAS KHAVIGLTKS AAIEYAKKRI
RVNAVCPAVI DTDMFRRAYE ADPRKAEFAA AMHPVGRIGK VEEIASAVLY LCSDGAAFTT
GHSLTVDGGA TAI