| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1393 |
|---|
| Symbol | |
|---|
| ID | 6110321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 1525865 |
|---|
| End bp | 1526797 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641621167 |
|---|
| Product | KpsF/GutQ family protein |
|---|
| Protein accession | YP_001748267 |
|---|
| Protein GI | 170720579 |
|---|
| COG category | [K] Transcription
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
|---|
| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCACC TCTCCATTGC TAAAGAAGCA CTGCTTGCAC AAGCTAAAGC TGTAGAGACA
TTAGCTGAGC GACTGAATGA AAGTTTTCAA CGCGCCGTCG AACTGCTGCT CTCTTGCAAG
GGTAGAGCCG TTGTATGCGG GATGGGTAAG TCAGGGCTTA TCGGCCAAAA AATGGTCGCT
ACTTTTGCTT CGACAGGCAC GCCCAGTTTT TTTCTCCACC CGGCTGAGGC GTTCCACGGC
GACCTAGGTA TGCTGAAGCC AGTCGATGTG CTGATACTCA TTAGCTACAG CGGTGAGACC
GAAGAGCTAA TCAAGCTGAT CCCCAGCCTA AAGTCATTTG GTAATAAATT AATTTCAATA
ACTGGCAATG GAACTTCCAC ACTTGCCAAA CATTCGGATA TTTGGCTGGA TATTTCCGTG
GAGCGCGAGG TGTGTCCGAA CAACTTGGCG CCTACCACCT CCACGCTAGC GACCATGGCC
ATGGGCGACG CACTTGCTGT TGCGTTGATT GAAGCTATTC AGTTCAAGCC TATGGATTTT
GCTCGTTACC ACCCGGGCGG CAGCCTCGGT CGTAAATTGC TAACTCGCGT AAAAGATGTT
ATGCACTCTC CAGCCCCAAT TGTGGGGCGG GAAACGAGTT TTCATGATTG TCTGCTGGCA
ATGACGCAAA GCAGGCTAGG CCTTGCGATT GTGATGGAAG AGCAGCGGTT GGTTGGTATC
GTGACGGATG GCGACCTCCG CCGTGCACTG CTTGAGAACG AACGGATTGT TCGGGAAAAA
GTTGCGCAAT TCATGACCGC TAAACCGCAC ACCATAATGG AAGATGCGCA GTTGTCCGAG
GCGGAGCTAT ACATGCGCGA AAATAAAATT AGAGCACTCG CGGTTACGAA TAGTCAGGGT
GGGGTGGTAG GGGTTGTTGA AATTTTCGAT TGA
|
|---|
| Protein sequence | MNHLSIAKEA LLAQAKAVET LAERLNESFQ RAVELLLSCK GRAVVCGMGK SGLIGQKMVA
TFASTGTPSF FLHPAEAFHG DLGMLKPVDV LILISYSGET EELIKLIPSL KSFGNKLISI
TGNGTSTLAK HSDIWLDISV EREVCPNNLA PTTSTLATMA MGDALAVALI EAIQFKPMDF
ARYHPGGSLG RKLLTRVKDV MHSPAPIVGR ETSFHDCLLA MTQSRLGLAI VMEEQRLVGI
VTDGDLRRAL LENERIVREK VAQFMTAKPH TIMEDAQLSE AELYMRENKI RALAVTNSQG
GVVGVVEIFD
|
|---|
| |