Gene PputW619_1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1393 
Symbol 
ID6110321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp1525865 
End bp1526797 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content51% 
IMG OID641621167 
ProductKpsF/GutQ family protein 
Protein accessionYP_001748267 
Protein GI170720579 
COG category[M] Cell wall/membrane/envelope biogenesis
[K] Transcription 
COG ID[COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains 
TIGRFAM ID[TIGR00393] KpsF/GutQ family protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCACC TCTCCATTGC TAAAGAAGCA CTGCTTGCAC AAGCTAAAGC TGTAGAGACA 
TTAGCTGAGC GACTGAATGA AAGTTTTCAA CGCGCCGTCG AACTGCTGCT CTCTTGCAAG
GGTAGAGCCG TTGTATGCGG GATGGGTAAG TCAGGGCTTA TCGGCCAAAA AATGGTCGCT
ACTTTTGCTT CGACAGGCAC GCCCAGTTTT TTTCTCCACC CGGCTGAGGC GTTCCACGGC
GACCTAGGTA TGCTGAAGCC AGTCGATGTG CTGATACTCA TTAGCTACAG CGGTGAGACC
GAAGAGCTAA TCAAGCTGAT CCCCAGCCTA AAGTCATTTG GTAATAAATT AATTTCAATA
ACTGGCAATG GAACTTCCAC ACTTGCCAAA CATTCGGATA TTTGGCTGGA TATTTCCGTG
GAGCGCGAGG TGTGTCCGAA CAACTTGGCG CCTACCACCT CCACGCTAGC GACCATGGCC
ATGGGCGACG CACTTGCTGT TGCGTTGATT GAAGCTATTC AGTTCAAGCC TATGGATTTT
GCTCGTTACC ACCCGGGCGG CAGCCTCGGT CGTAAATTGC TAACTCGCGT AAAAGATGTT
ATGCACTCTC CAGCCCCAAT TGTGGGGCGG GAAACGAGTT TTCATGATTG TCTGCTGGCA
ATGACGCAAA GCAGGCTAGG CCTTGCGATT GTGATGGAAG AGCAGCGGTT GGTTGGTATC
GTGACGGATG GCGACCTCCG CCGTGCACTG CTTGAGAACG AACGGATTGT TCGGGAAAAA
GTTGCGCAAT TCATGACCGC TAAACCGCAC ACCATAATGG AAGATGCGCA GTTGTCCGAG
GCGGAGCTAT ACATGCGCGA AAATAAAATT AGAGCACTCG CGGTTACGAA TAGTCAGGGT
GGGGTGGTAG GGGTTGTTGA AATTTTCGAT TGA
 
Protein sequence
MNHLSIAKEA LLAQAKAVET LAERLNESFQ RAVELLLSCK GRAVVCGMGK SGLIGQKMVA 
TFASTGTPSF FLHPAEAFHG DLGMLKPVDV LILISYSGET EELIKLIPSL KSFGNKLISI
TGNGTSTLAK HSDIWLDISV EREVCPNNLA PTTSTLATMA MGDALAVALI EAIQFKPMDF
ARYHPGGSLG RKLLTRVKDV MHSPAPIVGR ETSFHDCLLA MTQSRLGLAI VMEEQRLVGI
VTDGDLRRAL LENERIVREK VAQFMTAKPH TIMEDAQLSE AELYMRENKI RALAVTNSQG
GVVGVVEIFD