| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1390 |
|---|
| Symbol | |
|---|
| ID | 6110318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 1521841 |
|---|
| End bp | 1523460 |
|---|
| Gene Length | 1620 bp |
|---|
| Protein Length | 539 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641621164 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001748264 |
|---|
| Protein GI | 170720576 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.2977 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTTC TTGTCATATC CAATTTCTTC CCGCCCCATG TGATCGGCGG TGCAGAAATC
ATCGCTCACC ACCAGGCCCG CGCGCTGGCT GCGCGTGGTC ATGAAGTGCG CGTGCTGGCA
GGGGACAACA GCCGTGGGCT GCCTGGCTAC CCAGTGGAGC AGGAGGTTTT CGACGGCATG
CCGGTTACCC GGGTGTCGTT GACCTATCTG GACTTTGCCC CAACCGGCAA CAACGTCGCG
CACCCCGGCG TCGAACGTAT CTTTCTGCGC CTGATCGCTC AATGGCGCCC CGATGTGATC
CACGCGCACC ACATGGCCGG GTTGTCCTTG GGCATCCTGC AGTTGGCGCG TGAGCATGGG
ATCCGCATTG CGCTGACCTT GCACGACCAC TGGGGGTTCT GCATGAACAG CACGCGCATC
ACCACCCAGG ACACCTTGTG CCAAGACAGC ACCCAATGCC ACAAATGTCA TTCGCACATC
TACAACGGTG ACCTGCTGCT GCCGCAACGG ATGCGCCAGG ACTACCTGCG CTGGCAATTG
GATGCTGTTG ATCATTTCAT TTCACCCAGC CGTTACCTGG CCGACACCTA CATCGCCAAC
GGCCTGCCTG CCGCGCGTAT GAATGTTATC GCCAACGGTA TCGAACTCGA GCGGTTCAGC
CACACCTCAC CGCCACCGCC CGGGCCGCGC CTGAATGTGC TGTTCACCGG CTACATGGGT
GGCCATAAAG GCGTACCTAC CTTGCTCAAG GCGCTGGCAT TGCTGCCGCC AGAGCGGGTG
CATGTCGACA TGGTCGGTGA CGGCCATATG CTTGAAACCT ACAAAGCCGA ACTGCGCAAC
AATGCGCCGA AGGTTTCTGC CAAGTTCTGG GGCAGACTGC CCAATGCGCG TATCGCCGAG
CGCTTCGCCC AGGCGCATGT GTTCGTGCTG CCATCGGTGT GCCCGGAAAA CCAACCTGTG
ACCATTACCG AGGCGATGTC CTGTGGCCTG GCGGTGGTGG GTTCACGGAT AGGCGGCATA
CCCGAGCTGG TGGATGAAGG CGTGACCGGT CAGTTGTTCG ACCACGGCGA CGCTCAAGCG
CTGGCGCGCT GCTTGCTCCG TTACATCGAA GAGCCGGCGG TGTTGGAAGC CCATGGCAAG
GCGGGTCGTG AGCGCATCCA GGCCTATGCC TTCGAGCTGC AGATCGACCG TATCGAAGCC
TTGCTGGCCG GCCCTGGCGC CGAACGTAGC GAGGCCCCAC AACTGATCGC ATGCCATGGC
GCTCCATCGG CTGAAACCTT CCAGAGCGTT CTCAAGGCGC TGTGCCCGGT TCCTGCCAAC
CGGCCGCAGC CTGCCAGCCA GCCCTGCTGC ATTCCCTCGA ACTGGATTGC GCCAGAGCAA
GCAGATGTAC TGTGGGTGGC GGGGCCAACA GCCCAAGACC CGGACGCCGC GATGAAGCTC
ATCGAAGCTT ACCGCGCCTT GGGCAAACAG GTTGTGGTGG ATGAGCGCCA TCTGCTGGTT
GCGCGCAACA CGGAGTCAGC CTTGCTGGCG CGCGGCGGCG CGCAGGTAGC GTTAAGCTTG
GAATACCTCT TGGAGTACGC GAGGGATCCT GAGGCACAAA CTGCCCCAAC CCAAGCCTGA
|
|---|
| Protein sequence | MKVLVISNFF PPHVIGGAEI IAHHQARALA ARGHEVRVLA GDNSRGLPGY PVEQEVFDGM
PVTRVSLTYL DFAPTGNNVA HPGVERIFLR LIAQWRPDVI HAHHMAGLSL GILQLAREHG
IRIALTLHDH WGFCMNSTRI TTQDTLCQDS TQCHKCHSHI YNGDLLLPQR MRQDYLRWQL
DAVDHFISPS RYLADTYIAN GLPAARMNVI ANGIELERFS HTSPPPPGPR LNVLFTGYMG
GHKGVPTLLK ALALLPPERV HVDMVGDGHM LETYKAELRN NAPKVSAKFW GRLPNARIAE
RFAQAHVFVL PSVCPENQPV TITEAMSCGL AVVGSRIGGI PELVDEGVTG QLFDHGDAQA
LARCLLRYIE EPAVLEAHGK AGRERIQAYA FELQIDRIEA LLAGPGAERS EAPQLIACHG
APSAETFQSV LKALCPVPAN RPQPASQPCC IPSNWIAPEQ ADVLWVAGPT AQDPDAAMKL
IEAYRALGKQ VVVDERHLLV ARNTESALLA RGGAQVALSL EYLLEYARDP EAQTAPTQA
|
|---|
| |