Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1387 |
Symbol | |
ID | 6110315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 1516180 |
End bp | 1517388 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641621161 |
Product | ABC transporter related |
Protein accession | YP_001748261 |
Protein GI | 170720573 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.928113 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTATTC TCGTAGAACA GGTAGGCAAG GCCTATCCAA AACTCAAAGG TCGCTGGCAC GCACTGGGTA CATGGCTTGG GCTGTGCAAG CGCGATCAGA ACTGGATCAT CCGGAACGTC AGTTTCCAGG TGGGGCAGGG TGAGTCGGTC GGTATCATCG GGGTTAACGG CGCAGGCAAG AGTACGCTGC TGAAGATGAT TACCGGTACC GCCATGCCGA CGGAAGGCAC CATTACCACC ACAGGGCGCA TTGCCGCGTT GCTGGAGCTG GGTATGGGCT TTCACCCCGA ATTCACCGGC CGCCAGAACG TCGCGCTGGC TGGGCGCATG CAGGGGCTGG AGCGGGCCGA GATTGTCGCG TTGATGCCAG AGATCGAAGC CTTCGCGGAA ATCGGTCATT ACTTCGACAT GCCCGTGCGC ACTTATTCCT CCGGTATGTT TGTGCGCCTG GCGTTCAGCG TGGCGACTGC GGTGCGCCCG GAAGTGTTGA TCGTGGACGA GGCCCTGGCG GTGGGCGATG CCTACTTCCA ACACAAGTCT TTTGCGCGGA TCCGTGACTT CCGCGAGCAG GGCACAACCT TGCTGTTTGT TTCCCACGAT CCCGGCGCCA TCAAGAGCCT GTGTGACCGT GCCATCCTGC TGGGTGATCA CAAAATGTTG ATGGATGGCC GCCCGGATGA AGTGCTGGAT TATTACAACG CGCTGATTGC CAAAAAAGAA GAAGGCTCCT TGCAGGCCCA GGCTGTCAAC GCGCCCTACG CAGGGCGCTC TGGCAACGGA AAAGCGCGTA TCGAAGAGCT TACCCTCAGC AGCAATGGCC GGGCGGCTAC CATGCTTGAA GTGGGTGCGC CGTTGACGTT GAACCTGAAA ATCCGCTCTA ACGAGCCCAT TTACGACTTG TCGCTGGGCT TCATGTTCAA AGACCGCACG GGTTACGACA TCTTCGGGAC CAACACCTGG CTGCGTGGCG AGCTGCGCGA CCTGGGTGTC GAGGCCGGCA AGGAACAGCA CCTGACCGTT ACCATTCCGG CATTCAACGT AGGGCCTGGC AGCTACAGCC TGACTTTGGC CTTGCACGGT GGTGCCGACC ATATCGAGGA TAACTTCGAC TGGTGGGACA AGGCGGTGGT ATTCAATGTG ATCGCCAACA GCAGTTACAA GCACTTCGCC GGCGTGTGCG CCATGCAGGC AGAGTTCAAG CTTGACTGA
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Protein sequence | MTILVEQVGK AYPKLKGRWH ALGTWLGLCK RDQNWIIRNV SFQVGQGESV GIIGVNGAGK STLLKMITGT AMPTEGTITT TGRIAALLEL GMGFHPEFTG RQNVALAGRM QGLERAEIVA LMPEIEAFAE IGHYFDMPVR TYSSGMFVRL AFSVATAVRP EVLIVDEALA VGDAYFQHKS FARIRDFREQ GTTLLFVSHD PGAIKSLCDR AILLGDHKML MDGRPDEVLD YYNALIAKKE EGSLQAQAVN APYAGRSGNG KARIEELTLS SNGRAATMLE VGAPLTLNLK IRSNEPIYDL SLGFMFKDRT GYDIFGTNTW LRGELRDLGV EAGKEQHLTV TIPAFNVGPG SYSLTLALHG GADHIEDNFD WWDKAVVFNV IANSSYKHFA GVCAMQAEFK LD
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