Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1293 |
Symbol | actP |
ID | 6110221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 1432233 |
End bp | 1433897 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641621067 |
Product | acetate permease |
Protein accession | YP_001748167 |
Protein GI | 170720479 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02711] cation/acetate symporter ActP |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCGCC ACACCAAAGC CTTGGCCGTA CTGGCCTGCG GCGTTTTCGC ACCCGCTGTG TGGGCAGCCG ATGCCCTGAC CGGCGAGGTG CAGAAACAAC CGCTGAACGT TGCAGCGATC GCCATGTTCG TGGCCTTCGT CGCCTTTACC TTGGGCATCA CCTACTGGGC CTCCAAGCGT AACAAGTCGG CAGCCGACTA CTACGCTGCC GGCGGCAAGA TCACCGGCTT TCAGAACGGC CTGGCGATTG CCGGCGACTA CATGTCGGCA GCGTCGTTCC TGGGTATTTC CGCGCTGGTG TTCACCTCCG GCTACGACGG CCTGATCTAC TCGATCGGCT TTTTGGTCGG CTGGCCGATC ATTCTGTTCC TGATCGCCGA ACGCCTGCGC AACCTGGGCA AATACACCTT TGCCGACGTG GCGTCCTACC GCCTGGGGCA AAAGGAAATC CGTACCCTGT CGGCCTCCGG TTCGCTGGTG GTGGTGGCGT TCTACCTGAT CGCGCAGATG GTCGGCGCCG GCAAGCTGAT CGAACTGCTG TTCGGCCTGG ACTACCATGT GGCGGTTATC CTGGTGGGCG TCCTGATGTG CCTGTACGTG CTGTTCGGCG GCATGCTGGC CACCACCTGG GTACAGATCA TCAAGGCCGT ACTGCTGCTG TCCGGCGCCA GCTTCATGGC ACTGATGGTC ATGAAACACG TGGGCTTCGA CTTCAACACC CTGTTCTCCG AAGCGATCAA GGTGCACAGC AAGGGCGAGG CGATCATGAG CCCGGGCGGC CTGGTCAAGG ACCCGATCTC TGCCTTCTCG CTGGGCCTGG CGCTGATGTT CGGTACTGCC GGCCTGCCGC ATATCCTGAT GCGCTTCTTC ACCGTCAGCG ACGCCAAGGA AGCGCGCAAG AGCGTGCTCT ACGCCACCGG TTTCATCGGC TACTTCTATA TCCTGACCTT CATCATCGGT TTTGGCGCGA TCCTGCTGGT CAGCACCAAC CCGGACTTCA AGGACGCCGC CGGCGCCCTG CTGGGCGGCA ACAACATGGC CGCGGTGCAT TTGGCTGATG CCGTGGGTGG CAGCATCTTC CTCGGCTTCA TCTCGGCGGT GGCGTTCGCC ACCATCCTGG CGGTGGTTGC CGGCCTGACC CTGGCCGGTG CCTCGGCGGT ATCCCATGAC CTGTACGCCA GCGTGTGGCG CAAAGGCAAG GCCAACGACA AGGACGAGAT CCGCGTCTCG AAGATCACCA CCATCGCCCT TGGCGTGCTG GCGATCGGCC TGGGGATTCT GTTTGAGAAG CAGAACATCG CCTTCATGGT CGGCCTGGCG TTCTCCATTG CCGCCAGCTG CAACTTCCCG GTACTGCTGC TTTCGATGTA CTGGAAGAAG CTGACCACCC GCGGCGCCAT GATCGGCGGC TGGCTGGGCC TGGTGAGTGC AGTGACACTG ATGATCCTTG GCCCGACCAT CTGGGTGCAG ATCCTCGGCC ACGAGAAGCC GATTTACCCT TACGAGTACC CGGCACTGTT CTCGATGCTG ATTGCCTTCG TCGGTATCTG GTTCTTCTCG GTCACCGACA AGTCCAAGGC GGCTGAAAGC GAACGTGCGC TGTTCTTCCC GCAGTTCGTC CGCTCGCAAA CCGGCCTGGG GGCTTCAGGC GCCGTTTCGC ACTGA
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Protein sequence | MIRHTKALAV LACGVFAPAV WAADALTGEV QKQPLNVAAI AMFVAFVAFT LGITYWASKR NKSAADYYAA GGKITGFQNG LAIAGDYMSA ASFLGISALV FTSGYDGLIY SIGFLVGWPI ILFLIAERLR NLGKYTFADV ASYRLGQKEI RTLSASGSLV VVAFYLIAQM VGAGKLIELL FGLDYHVAVI LVGVLMCLYV LFGGMLATTW VQIIKAVLLL SGASFMALMV MKHVGFDFNT LFSEAIKVHS KGEAIMSPGG LVKDPISAFS LGLALMFGTA GLPHILMRFF TVSDAKEARK SVLYATGFIG YFYILTFIIG FGAILLVSTN PDFKDAAGAL LGGNNMAAVH LADAVGGSIF LGFISAVAFA TILAVVAGLT LAGASAVSHD LYASVWRKGK ANDKDEIRVS KITTIALGVL AIGLGILFEK QNIAFMVGLA FSIAASCNFP VLLLSMYWKK LTTRGAMIGG WLGLVSAVTL MILGPTIWVQ ILGHEKPIYP YEYPALFSML IAFVGIWFFS VTDKSKAAES ERALFFPQFV RSQTGLGASG AVSH
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