| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1268 |
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| Symbol | |
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| ID | 6110196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1406318 |
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| End bp | 1408399 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641621042 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_001748142 |
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| Protein GI | 170720454 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000748265 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0247488 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCATT TCCTCCCAAG CACCGCCCTG GCCCTGATGA TCGGCCTGGG CAGCCTCACG
CTCGGCGGCA ATGCGGCGGC CGCCAACAAA TGGGACAGCC TGCAGCCGGA CCGTGACGAA
ATCGTCGCCA GCCTCAACGT GGTTGAGTTG CTCAAACGTC ACCATTACAG CAAGCCGCCG
CTCGATGACG CCCGTTCGGT GATCATCTAC GACAGCTACA TCAAGCTGCT CGACCCAGCG
CGCAGCTACT TCACTGCGGC CGACATCGCC GAGTTCGACA AGTGGAAGAG GCAGTTCGAC
GACTTCCTCA AAAGCGGCAA CCTCGACCCT GGCTTCACCA TCTACAAGCG CTACCTGGAC
CGCGTCAAGC AACGCCTGGA CTTCGCCCTG GCCGAGCTGA ACAAGGGCGT CGACAAGATG
GACTTCACCG CCAAGGAAAC CTTGCTGATC GACCGCAAGG ACGCTCCGTG GCTGAAGAAC
CAGGCCGAGC TGGACGACCT GTGGCGCAAG CGCGTCAAGG ACGAGGTGCT GCGCCAGAAG
ATCGCCGGCA AAGAGCCCAA GCAGATTCAG GAAACCCTGA CCAAGCGTTA CAAGAACCAG
CTGTCGCGCC TGGACCAGAC CCGTGCCGAA GACATCTTCC AGGCCTACAT CAATACCTTC
GCCCAGTCCT ACGACCCGCA CACCAACTAC CTGTCGCCGG ACAACGCCGA GAACTTCGAC
ATCAACATGA GCCTGTCGCT CGAAGGCATC GGCGCGGTGC TGCAGAGCGA CAATGATCAG
GTCAAGATCG TGCGTCTGGT GCCAGCGGGC CCTGCGGCCA AGACCAAGCA GGTGGCCCCG
GCCGACAAGA TCATCGGCGT CGCCCAAGGC AACAAAGAAA TGGTCGACGT GGTCGGCTGG
CGCCTGGACG AAGTGGTCAA GCTGATTCGT GGCCCGAAAG GCTCGGTTGT GCGCCTGGAA
ATCATCCCGG CCAGCAATGC CCCGAGCGAC CAGACCAGCA AAGTGGTGTC GATCACCCGT
GAGGCGGTCA AGCTCGAAGA GCAGGCGGCC AAGAAGTCGG TGCTCAAGCT CAAGCAGGCT
GGCCGTGACT ACAAGCTGGG CATCATTGAA ATCCCTGCCT TCTATCTGGA CTTCAAGGCT
TACCGGGCCG GGGACCCTGA GTACAAGAGC ACCACGCGCG ACGTGAAAAA GCTGCTCACC
GAACTGCAAA AGGAAAAAGT CGACGGCGTG GTCATCGACC TGCGCAACAA CGGCGGCGGT
TCCCTGCAGG AAGCCACCGA GCTGACCAGC CTGTTCATCG AGAAGGGCCC CACGGTTCTG
GTTCGCAACA GCGATGGCCG GGTTGACGTG CTAGAAGACG AAAATCCTGG CGCCTTCTAC
AAAGGCCCCT TGGTACTGCT GGTCAACCGC CTCTCGGCCT CGGCCTCGGA AATCTTCGCA
GGCGCCATGC AGGATTACCA CCGCGCCCTG ATCATAGGCG GCCAGACCTT CGGCAAGGGC
ACCGTGCAAA CCATCCAGCC GCTCAACCAT GGCGAGCTGA AACTGACCCT GGCCAAGTTC
TACCGGGTGT CCGGGCAGAG CACCCAGCAT CAGGGCGTAC TGCCAGACAT CGATTACCCG
TCGATCATCG ACACCAAGGA AATCGGTGAA AGCGCCCTGC CCGAGGCCAT GCCGTGGGAC
ACCATCCGCC CGGTGGTCAA GCCGGCGGCC GACCCGTTCA AGCCCTTCCT GGCGCAGCTC
AAGGCCCAGC ATGAAGCGCG CAGCGACAAG GACGCGGAGT TCACCTATAT CCGTGACCGC
CTGGCACTGA CCCAGAAGCT GATGAACGAG AAGACCGTCA GCCTCAACGA GCAGGACCGC
CGTGCCCGCC ATGATGAGAT CGAGGCCAAA CAGCTGGCGC TGGAAAACAT CCGCCGCAAG
GCCAAGGGTG AAGAGCCGCT GAAGGAACTG AAGAAAGAGG ACGAGGACGC CCTGCCGACC
GAGGATGAAA ACACCAAGCC CGAAGACGAC GCTTATCTGT CCGAGACGGG TCGCATCCTG
ATCGACTACC TGAGTGCCAG CACCAAGGTG GCCAAGCAGT AA
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| Protein sequence | MKHFLPSTAL ALMIGLGSLT LGGNAAAANK WDSLQPDRDE IVASLNVVEL LKRHHYSKPP
LDDARSVIIY DSYIKLLDPA RSYFTAADIA EFDKWKRQFD DFLKSGNLDP GFTIYKRYLD
RVKQRLDFAL AELNKGVDKM DFTAKETLLI DRKDAPWLKN QAELDDLWRK RVKDEVLRQK
IAGKEPKQIQ ETLTKRYKNQ LSRLDQTRAE DIFQAYINTF AQSYDPHTNY LSPDNAENFD
INMSLSLEGI GAVLQSDNDQ VKIVRLVPAG PAAKTKQVAP ADKIIGVAQG NKEMVDVVGW
RLDEVVKLIR GPKGSVVRLE IIPASNAPSD QTSKVVSITR EAVKLEEQAA KKSVLKLKQA
GRDYKLGIIE IPAFYLDFKA YRAGDPEYKS TTRDVKKLLT ELQKEKVDGV VIDLRNNGGG
SLQEATELTS LFIEKGPTVL VRNSDGRVDV LEDENPGAFY KGPLVLLVNR LSASASEIFA
GAMQDYHRAL IIGGQTFGKG TVQTIQPLNH GELKLTLAKF YRVSGQSTQH QGVLPDIDYP
SIIDTKEIGE SALPEAMPWD TIRPVVKPAA DPFKPFLAQL KAQHEARSDK DAEFTYIRDR
LALTQKLMNE KTVSLNEQDR RARHDEIEAK QLALENIRRK AKGEEPLKEL KKEDEDALPT
EDENTKPEDD AYLSETGRIL IDYLSASTKV AKQ
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